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COX6A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:1030.7 nTPM
HPA:1030.7 nTPM
GTEx:1162.3 nTPM
FANTOM5:461.1 Scaled Tags Per Million
Pig:42.7 nTPM
Mouse:714.9 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062394
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1030.7
Sample id Sample description nTPM
Hippocampus
nTPM: 1004.9
1898 Male, age 80, left hemisphere 1079.5
2529 Female, age 94, left hemisphere 1069.4
2621 Female, age 67, right hemisphere 1014.6
1855 Male, age 76, left hemisphere 968.5
1911 Female, age 85, right hemisphere 960.1
2148 Female, age 91, left hemisphere 937.2
Dentate gyrus
nTPM: 977.6
2010 Male, age 76, both hemispheres 999.4
2246 Female, age 85, both hemispheres 991.2
2530 Female, age 94, left hemisphere 990.7
1927 Female, age 91, both hemispheres 980.6
2528 Male, age 74, both hemispheres 952.2
2531 Female, age 67, both hemispheres 951.6
Entorhinal gyrus
nTPM: 970.3
2764 Male, age 80, right hemisphere 1019.4
1787 Male, age 76, left hemisphere 1001.0
1938 Female, age 85, left hemisphere 977.2
2613 Female, age 94, left hemisphere 963.0
2117 Female, age 91, right hemisphere 949.8
2686 Male, age 75, right hemisphere 911.3
Hippocampus, CA1
nTPM: 1021.0
2749 Male, age 80, left hemisphere 1190.9
2527 Male, age 74, both hemispheres 1028.2
1873 Female, age 85, both hemispheres 979.8
2082 Female, age 91, right hemisphere 965.2
2045 Male, age 76, both hemispheres 940.6
Hippocampus, CA2
nTPM: 1008.8
1963 Male, age 80, left hemisphere 1078.2
1892 Male, age 76, both hemispheres 1036.9
2437 Female, age 94, left hemisphere 1031.7
2249 Male, age 74, both hemispheres 1025.6
2113 Female, age 91, right hemisphere 954.0
1940 Female, age 85, left hemisphere 926.5
Hippocampus, CA3
nTPM: 992.3
2137 Male, age 80, left hemisphere 1078.1
1867 Male, age 76, both hemispheres 1021.9
2436 Male, age 74, both hemispheres 1007.4
1891 Female, age 85, both hemispheres 974.8
2620 Female, age 94, left hemisphere 938.0
2861 Female, age 67, both hemispheres 933.7
Parahippocampal cortex
nTPM: 991.7
2250 Female, age 67, right hemisphere 1097.4
2245 Female, age 91, both hemispheres 1027.8
1850 Male, age 80, both hemispheres 1009.5
1990 Female, age 91, right hemisphere 1005.6
1933 Female, age 85, both hemispheres 1002.5
2018 Male, age 76, both hemispheres 978.3
2532 Female, age 72, left hemisphere 971.1
2693 Female, age 94, both hemispheres 949.9
2692 Male, age 74, both hemispheres 939.6
2622 Female, age 67, right hemisphere 935.6
Perirhinal gyrus
nTPM: 1030.7
1847 Female, age 91, left hemisphere 1114.0
1794 Male, age 80, right hemisphere 1048.8
2521 Female, age 94, right hemisphere 1032.9
1841 Female, age 85, right hemisphere 1006.8
2848 Male, age 76, right hemisphere 950.8
Subiculum
nTPM: 1000.8
2438 Female, age 94, left hemisphere 1070.8
2619 Male, age 74, both hemispheres 1018.4
1977 Female, age 85, both hemispheres 1017.3
1901 Male, age 80, both hemispheres 1016.9
2042 Male, age 76, both hemispheres 946.6
2729 Female, age 91, right hemisphere 934.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1162.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1162.3
Samples: 197

Max nTPM: 2793.9
Min nTPM: 400.9
Std nTPM: 443.9
Median nTPM: 1069.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2793.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 2619.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 2600.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2596.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2475.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 2457.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2360.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2326.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 2301.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 2191.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2174.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 461.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 461.1
FF:10153-102I9 76 years, female 497.4
FF:10169-103B7 60 years, female 424.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 56.8
Min nTPM: 29.5
Sample A Female 56.8
Sample B Female 37.5
Sample C Male 47.2
Sample D Male 29.5
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 44.7
Min nTPM: 28.0
Sample A Female 35.8
Sample B Female 44.7
Sample C Male 39.4
Sample D Male 28.0
Subiculum
nTPM: 34.3
Samples: 4

Max nTPM: 46.8
Min nTPM: 29.5
Sample A Female 46.8
Sample B Female 30.9
Sample C Male 29.5
Sample D Male 29.9
Ventral hippocampus
nTPM: 39.4
Samples: 4

Max nTPM: 45.6
Min nTPM: 28.5
Sample A Female 43.6
Sample B Female 28.5
Sample C Male 45.6
Sample D Male 40.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 714.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 682.5
Samples: 4

Max nTPM: 723.8
Min nTPM: 630.0
Sample A Male 687.8
Sample B Male 723.8
Sample C Female 688.2
Sample D Female 630.0
Hippocampal formation
nTPM: 714.9
Samples: 4

Max nTPM: 777.6
Min nTPM: 647.0
Sample A Male 777.6
Sample B Male 663.2
Sample C Female 647.0
Sample D Female 771.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
69080022 Antisense, RP_050324_01_D12, Mouse strain C57BL/6J (56 days, male) 6.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.