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BTN2A1
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:10.7 nTPM
HPA:10.7 nTPM
GTEx:11.4 nTPM
FANTOM5:25.0 Scaled Tags Per Million

CAUDATE - Antibody stainingi
Antibody HPA019208
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 10.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 10.4
1781 Male, age 74, unknown 11.0
1857 Female, age 85, left hemisphere 10.7
2846 Female, age 79, unknown 10.7
2288 Male, age 75, left hemisphere 10.5
2481 Female, age 94, left hemisphere 10.3
2290 Female, age 72, unknown 10.2
2289 Male, age 61, right hemisphere 10.1
1854 Male, age 80, left hemisphere 9.7
Claustrum
nTPM: 10.7
2196 Female, age 79, unknown 11.5
2568 Male, age 61, both hemispheres 11.1
2491 Male, age 75, both hemispheres 11.0
2198 Male, age 80, both hemispheres 10.9
2645 Female, age 72, unknown 10.8
1956 Male, age 74, unknown 10.7
2292 Female, age 85, both hemispheres 10.4
2392 Female, age 94, both hemispheres 10.2
2284 Female, age 91, both hemispheres 9.8
Globus pallidus, externus
nTPM: 9.8
2395 Male, age 75, both hemispheres 11.1
2772 Female, age 79, unknown 10.2
1996 Male, age 80, right hemisphere 9.8
2567 Female, age 72, unknown 9.2
2646 Male, age 61, right hemisphere 8.6
Globus pallidus, internus
nTPM: 10.6
2778 Female, age 91, both hemispheres 11.5
2287 Male, age 75, right hemisphere 11.4
2566 Female, age 72, unknown 11.0
2037 Male, age 80, right hemisphere 10.9
2111 Female, age 85, right hemisphere 10.2
1818 Male, age 74, unknown 9.8
2483 Female, age 94, right hemisphere 9.7
Nucleus accumbens
nTPM: 10.5
2698 Female, age 72, unknown 11.5
1806 Female, age 85, left hemisphere 11.1
1783 Male, age 74, unknown 10.7
2286 Male, age 75, left hemisphere 10.6
2824 Male, age 61, right hemisphere 10.4
1856 Female, age 91, right hemisphere 10.3
2391 Female, age 94, left hemisphere 9.9
2732 Male, age 80, right hemisphere 9.3
Nucleus basalis of Meynert
nTPM: 9.8
2821 Male, age 75, both hemispheres 11.2
2484 Female, age 94, left hemisphere 9.8
2393 Male, age 80, right hemisphere 9.7
2569 Male, age 61, both hemispheres 8.4
Nucleus of the diagonal band
nTPM: 10.7
2029 Male, age 61, right hemisphere 12.0
1812 Female, age 91, both hemispheres 10.7
1979 Male, age 74, unknown 10.6
2775 Male, age 80, right hemisphere 10.1
2195 Female, age 85, both hemispheres 9.9
Olfactory tubercle
nTPM: 10.2
1998 Female, age 91, both hemispheres 10.8
2487 Female, age 94, left hemisphere 10.3
2856 Male, age 75, right hemisphere 10.3
1846 Male, age 80, right hemisphere 9.5
Putamen
nTPM: 9.7
2482 Female, age 94, left hemisphere 10.5
1829 Male, age 74, unknown 10.1
1937 Female, age 91, right hemisphere 9.8
1838 Male, age 80, right hemisphere 9.6
2647 Male, age 75, left hemisphere 9.6
2466 Female, age 79, unknown 9.4
2489 Female, age 72, unknown 8.7
Septal nuclei
nTPM: 10.5
2629 Female, age 94, right hemisphere 11.6
2059 Female, age 85, both hemispheres 10.8
2199 Male, age 80, right hemisphere 10.5
1960 Male, age 74, unknown 10.4
2031 Female, age 72, unknown 10.4
2394 Male, age 61, left hemisphere 10.1
2009 Female, age 91, both hemispheres 9.8

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 11.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.3
Samples: 246

Max nTPM: 17.7
Min nTPM: 5.5
Std nTPM: 1.8
Median nTPM: 10.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 17.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 15.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 15.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 14.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 14.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 14.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 14.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 14.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 14.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 14.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 13.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 11.4
Samples: 246

Max nTPM: 19.9
Min nTPM: 7.2
Std nTPM: 2.1
Median nTPM: 11.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 19.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 16.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 16.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 16.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 15.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 15.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 15.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 15.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 15.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 14.9
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Brain - Putamen (basal ganglia)
Average nTPM: 10.2
Samples: 205

Max nTPM: 17.7
Min nTPM: 5.8
Std nTPM: 1.7
Median nTPM: 10.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 17.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 15.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 13.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 13.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 13.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 13.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 13.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 13.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 13.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 13.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.0
FF:10164-103B2 76 years, female 25.0
Globus pallidus
Scaled Tags Per Million: 22.1
FF:10161-103A8 76 years, female 23.8
FF:10175-103C4 60 years, female 20.5
Nucleus accumbens
Scaled Tags Per Million: 25.0
FF:10037-101F1 23-56 years, mixed 25.0
Putamen
Scaled Tags Per Million: 23.2
FF:10176-103C5 60 years, female 23.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.