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PPP2CA
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:57.8 nTPM
HPA:57.8 nTPM
GTEx:56.6 nTPM
FANTOM5:130.9 Scaled Tags Per Million
Pig:69.1 nTPM
Mouse:122.6 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043236Antibody CAB003848
Glial cells LowMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.9
1898 Male, age 80, left hemisphere 62.3
1855 Male, age 76, left hemisphere 48.7
1911 Female, age 85, right hemisphere 47.1
2621 Female, age 67, right hemisphere 46.2
2529 Female, age 94, left hemisphere 44.8
2148 Female, age 91, left hemisphere 44.2
Dentate gyrus
nTPM: 50.5
1927 Female, age 91, both hemispheres 61.1
2010 Male, age 76, both hemispheres 57.4
2528 Male, age 74, both hemispheres 50.8
2530 Female, age 94, left hemisphere 47.6
2246 Female, age 85, both hemispheres 46.1
2531 Female, age 67, both hemispheres 39.8
Entorhinal gyrus
nTPM: 46.0
1938 Female, age 85, left hemisphere 55.2
1787 Male, age 76, left hemisphere 49.7
2764 Male, age 80, right hemisphere 47.7
2613 Female, age 94, left hemisphere 43.9
2117 Female, age 91, right hemisphere 41.5
2686 Male, age 75, right hemisphere 38.2
Hippocampus, CA1
nTPM: 54.7
2749 Male, age 80, left hemisphere 70.8
1873 Female, age 85, both hemispheres 58.5
2045 Male, age 76, both hemispheres 49.8
2527 Male, age 74, both hemispheres 49.3
2082 Female, age 91, right hemisphere 44.9
Hippocampus, CA2
nTPM: 50.2
1892 Male, age 76, both hemispheres 61.0
1963 Male, age 80, left hemisphere 57.5
2249 Male, age 74, both hemispheres 53.9
1940 Female, age 85, left hemisphere 45.7
2113 Female, age 91, right hemisphere 41.7
2437 Female, age 94, left hemisphere 41.3
Hippocampus, CA3
nTPM: 50.8
2137 Male, age 80, left hemisphere 60.9
1867 Male, age 76, both hemispheres 56.8
1891 Female, age 85, both hemispheres 53.0
2436 Male, age 74, both hemispheres 50.7
2620 Female, age 94, left hemisphere 45.6
2861 Female, age 67, both hemispheres 37.8
Parahippocampal cortex
nTPM: 49.9
1850 Male, age 80, both hemispheres 62.2
1933 Female, age 85, both hemispheres 55.7
1990 Female, age 91, right hemisphere 55.7
2250 Female, age 67, right hemisphere 52.8
2693 Female, age 94, both hemispheres 50.7
2018 Male, age 76, both hemispheres 49.7
2532 Female, age 72, left hemisphere 47.6
2245 Female, age 91, both hemispheres 45.8
2692 Male, age 74, both hemispheres 41.6
2622 Female, age 67, right hemisphere 37.2
Perirhinal gyrus
nTPM: 57.8
1847 Female, age 91, left hemisphere 64.8
1841 Female, age 85, right hemisphere 63.8
1794 Male, age 80, right hemisphere 59.1
2521 Female, age 94, right hemisphere 55.0
2848 Male, age 76, right hemisphere 46.5
Subiculum
nTPM: 46.5
1977 Female, age 85, both hemispheres 54.0
1901 Male, age 80, both hemispheres 52.2
2729 Female, age 91, right hemisphere 45.1
2619 Male, age 74, both hemispheres 44.5
2042 Male, age 76, both hemispheres 44.4
2438 Female, age 94, left hemisphere 38.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.6
Samples: 197

Max nTPM: 126.8
Min nTPM: 27.8
Std nTPM: 17.5
Median nTPM: 53.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 126.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 113.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 101.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 100.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 97.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 93.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 93.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 91.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 90.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 90.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 90.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.9
FF:10169-103B7 60 years, female 147.5
FF:10153-102I9 76 years, female 114.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 89.1
Min nTPM: 53.1
Sample A Female 89.1
Sample B Female 69.7
Sample C Male 64.4
Sample D Male 53.1
Entorhinal cortex
nTPM: 61.1
Samples: 4

Max nTPM: 70.3
Min nTPM: 53.8
Sample A Female 61.0
Sample B Female 70.3
Sample C Male 59.2
Sample D Male 53.8
Subiculum
nTPM: 62.2
Samples: 4

Max nTPM: 76.9
Min nTPM: 55.7
Sample A Female 76.9
Sample B Female 57.7
Sample C Male 55.7
Sample D Male 58.6
Ventral hippocampus
nTPM: 58.4
Samples: 4

Max nTPM: 69.6
Min nTPM: 47.0
Sample A Female 69.6
Sample B Female 47.0
Sample C Male 57.3
Sample D Male 59.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.8
Samples: 4

Max nTPM: 117.3
Min nTPM: 109.8
Sample A Male 109.8
Sample B Male 115.6
Sample C Female 116.4
Sample D Female 117.3
Hippocampal formation
nTPM: 122.6
Samples: 4

Max nTPM: 130.4
Min nTPM: 114.1
Sample A Male 129.1
Sample B Male 116.7
Sample C Female 130.4
Sample D Female 114.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
71836836 Antisense, RP_051017_02_B11, Mouse strain C57BL/6J (56 days, male) 18.9
67978736 Antisense, RP_040923_01_G05, Mouse strain C57BL/6J (56 days, male) 8.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.