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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.7 nTPM
HPA:14.7 nTPM
GTEx:23.1 nTPM
FANTOM5:48.2 Scaled Tags Per Million
Pig:8.7 nTPM
Mouse:12.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.7
1855 Male, age 76, left hemisphere 16.0
2529 Female, age 94, left hemisphere 14.7
1911 Female, age 85, right hemisphere 14.5
2148 Female, age 91, left hemisphere 14.3
2621 Female, age 67, right hemisphere 14.3
1898 Male, age 80, left hemisphere 14.2
Dentate gyrus
nTPM: 13.1
2530 Female, age 94, left hemisphere 15.1
2528 Male, age 74, both hemispheres 14.6
2246 Female, age 85, both hemispheres 13.4
2010 Male, age 76, both hemispheres 12.0
1927 Female, age 91, both hemispheres 11.8
2531 Female, age 67, both hemispheres 11.6
Entorhinal gyrus
nTPM: 11.3
2117 Female, age 91, right hemisphere 12.6
1938 Female, age 85, left hemisphere 12.1
2686 Male, age 75, right hemisphere 12.1
1787 Male, age 76, left hemisphere 10.9
2764 Male, age 80, right hemisphere 10.6
2613 Female, age 94, left hemisphere 9.9
Hippocampus, CA1
nTPM: 13.0
2527 Male, age 74, both hemispheres 16.5
1873 Female, age 85, both hemispheres 15.0
2082 Female, age 91, right hemisphere 11.7
2749 Male, age 80, left hemisphere 11.4
2045 Male, age 76, both hemispheres 10.6
Hippocampus, CA2
nTPM: 12.4
2249 Male, age 74, both hemispheres 14.9
1940 Female, age 85, left hemisphere 13.8
2113 Female, age 91, right hemisphere 12.8
1963 Male, age 80, left hemisphere 12.7
2437 Female, age 94, left hemisphere 11.8
1892 Male, age 76, both hemispheres 8.4
Hippocampus, CA3
nTPM: 11.8
2861 Female, age 67, both hemispheres 15.5
2436 Male, age 74, both hemispheres 12.7
1891 Female, age 85, both hemispheres 12.4
2137 Male, age 80, left hemisphere 10.5
2620 Female, age 94, left hemisphere 10.1
1867 Male, age 76, both hemispheres 9.3
Parahippocampal cortex
nTPM: 11.5
2622 Female, age 67, right hemisphere 13.1
2692 Male, age 74, both hemispheres 13.0
2245 Female, age 91, both hemispheres 12.5
1933 Female, age 85, both hemispheres 12.1
2250 Female, age 67, right hemisphere 11.9
1990 Female, age 91, right hemisphere 11.5
2018 Male, age 76, both hemispheres 11.0
1850 Male, age 80, both hemispheres 10.2
2693 Female, age 94, both hemispheres 9.9
2532 Female, age 72, left hemisphere 9.6
Perirhinal gyrus
nTPM: 10.6
1841 Female, age 85, right hemisphere 11.5
1794 Male, age 80, right hemisphere 10.7
1847 Female, age 91, left hemisphere 10.5
2521 Female, age 94, right hemisphere 10.2
2848 Male, age 76, right hemisphere 10.0
Subiculum
nTPM: 13.1
2729 Female, age 91, right hemisphere 14.9
2619 Male, age 74, both hemispheres 14.8
2438 Female, age 94, left hemisphere 14.7
1901 Male, age 80, both hemispheres 12.1
2042 Male, age 76, both hemispheres 11.2
1977 Female, age 85, both hemispheres 11.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.1
Samples: 197

Max nTPM: 76.7
Min nTPM: 4.3
Std nTPM: 15.3
Median nTPM: 17.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 76.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 75.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 72.4
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 66.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 65.7
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 63.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 63.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 62.6
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 59.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 59.2
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 58.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.2
FF:10153-102I9 76 years, female 53.5
FF:10169-103B7 60 years, female 42.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 10.4
Min nTPM: 5.4
Sample A Female 10.4
Sample B Female 6.9
Sample C Male 7.6
Sample D Male 5.4
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.5
Sample A Female 8.3
Sample B Female 7.5
Sample C Male 8.1
Sample D Male 6.5
Subiculum
nTPM: 8.7
Samples: 4

Max nTPM: 11.6
Min nTPM: 6.8
Sample A Female 11.6
Sample B Female 8.8
Sample C Male 7.6
Sample D Male 6.8
Ventral hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 10.9
Min nTPM: 5.2
Sample A Female 10.9
Sample B Female 8.0
Sample C Male 9.6
Sample D Male 5.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.9
Sample A Male 10.5
Sample B Male 10.4
Sample C Female 9.1
Sample D Female 6.9
Hippocampal formation
nTPM: 12.1
Samples: 4

Max nTPM: 15.9
Min nTPM: 8.0
Sample A Male 15.9
Sample B Male 13.1
Sample C Female 11.3
Sample D Female 8.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
100142550 Antisense, RP_110519_03_D06, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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