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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:54.8 nTPM
HPA:54.8 nTPM
GTEx:47.7 nTPM
FANTOM5:31.1 Scaled Tags Per Million
Mouse:104.2 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.8
Sample id Sample description nTPM
Hippocampus
nTPM: 52.2
1898 Male, age 80, left hemisphere 57.7
1855 Male, age 76, left hemisphere 53.1
2621 Female, age 67, right hemisphere 52.8
2148 Female, age 91, left hemisphere 52.1
2529 Female, age 94, left hemisphere 49.9
1911 Female, age 85, right hemisphere 47.4
Dentate gyrus
nTPM: 51.8
2530 Female, age 94, left hemisphere 54.7
1927 Female, age 91, both hemispheres 54.2
2010 Male, age 76, both hemispheres 51.8
2528 Male, age 74, both hemispheres 50.9
2531 Female, age 67, both hemispheres 50.2
2246 Female, age 85, both hemispheres 48.9
Entorhinal gyrus
nTPM: 52.2
2764 Male, age 80, right hemisphere 55.4
2613 Female, age 94, left hemisphere 52.9
2686 Male, age 75, right hemisphere 52.2
1938 Female, age 85, left hemisphere 52.1
1787 Male, age 76, left hemisphere 51.7
2117 Female, age 91, right hemisphere 48.7
Hippocampus, CA1
nTPM: 52.8
2749 Male, age 80, left hemisphere 63.9
1873 Female, age 85, both hemispheres 53.1
2527 Male, age 74, both hemispheres 51.0
2045 Male, age 76, both hemispheres 48.1
2082 Female, age 91, right hemisphere 47.9
Hippocampus, CA2
nTPM: 53.2
1963 Male, age 80, left hemisphere 58.7
1892 Male, age 76, both hemispheres 58.2
2437 Female, age 94, left hemisphere 53.0
2249 Male, age 74, both hemispheres 50.4
1940 Female, age 85, left hemisphere 49.7
2113 Female, age 91, right hemisphere 49.2
Hippocampus, CA3
nTPM: 52.7
2137 Male, age 80, left hemisphere 57.8
2861 Female, age 67, both hemispheres 55.1
1867 Male, age 76, both hemispheres 53.9
2620 Female, age 94, left hemisphere 51.3
2436 Male, age 74, both hemispheres 49.1
1891 Female, age 85, both hemispheres 48.9
Parahippocampal cortex
nTPM: 51.2
1850 Male, age 80, both hemispheres 55.2
2245 Female, age 91, both hemispheres 52.6
1933 Female, age 85, both hemispheres 52.0
2622 Female, age 67, right hemisphere 51.4
1990 Female, age 91, right hemisphere 51.1
2693 Female, age 94, both hemispheres 50.8
2250 Female, age 67, right hemisphere 50.6
2532 Female, age 72, left hemisphere 50.2
2692 Male, age 74, both hemispheres 50.1
2018 Male, age 76, both hemispheres 48.3
Perirhinal gyrus
nTPM: 54.8
1847 Female, age 91, left hemisphere 57.8
1794 Male, age 80, right hemisphere 56.1
1841 Female, age 85, right hemisphere 55.4
2521 Female, age 94, right hemisphere 52.6
2848 Male, age 76, right hemisphere 51.9
Subiculum
nTPM: 50.1
1901 Male, age 80, both hemispheres 52.3
1977 Female, age 85, both hemispheres 51.8
2438 Female, age 94, left hemisphere 50.9
2619 Male, age 74, both hemispheres 50.9
2729 Female, age 91, right hemisphere 47.9
2042 Male, age 76, both hemispheres 46.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.7
Samples: 197

Max nTPM: 104.0
Min nTPM: 17.6
Std nTPM: 15.8
Median nTPM: 45.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 104.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 90.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 88.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 84.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 84.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 80.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 78.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 78.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 78.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 77.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.1
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 25.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.2
Samples: 4

Max nTPM: 108.0
Min nTPM: 95.8
Sample A Male 95.8
Sample B Male 105.9
Sample C Female 107.0
Sample D Female 108.0
Hippocampal formation
nTPM: 95.1
Samples: 4

Max nTPM: 109.2
Min nTPM: 86.7
Sample A Male 109.2
Sample B Male 86.7
Sample C Female 92.6
Sample D Female 91.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
71280727 Antisense, RP_050818_01_E03, Mouse strain C57BL/6J (56 days, male) 2.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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