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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:75.4 nTPM
HPA:75.4 nTPM
GTEx:110.0 nTPM
FANTOM5:164.6 Scaled Tags Per Million
Pig:41.5 nTPM
Mouse:305.2 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046091
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.4
Sample id Sample description nTPM
Hippocampus
nTPM: 74.1
1898 Male, age 80, left hemisphere 79.2
2621 Female, age 67, right hemisphere 76.1
1855 Male, age 76, left hemisphere 75.6
2529 Female, age 94, left hemisphere 72.7
1911 Female, age 85, right hemisphere 71.8
2148 Female, age 91, left hemisphere 68.9
Dentate gyrus
nTPM: 73.1
2010 Male, age 76, both hemispheres 76.9
2530 Female, age 94, left hemisphere 75.9
2246 Female, age 85, both hemispheres 73.0
2528 Male, age 74, both hemispheres 72.8
1927 Female, age 91, both hemispheres 71.8
2531 Female, age 67, both hemispheres 68.0
Entorhinal gyrus
nTPM: 71.8
1938 Female, age 85, left hemisphere 73.5
1787 Male, age 76, left hemisphere 72.8
2117 Female, age 91, right hemisphere 71.6
2764 Male, age 80, right hemisphere 71.6
2686 Male, age 75, right hemisphere 71.1
2613 Female, age 94, left hemisphere 70.2
Hippocampus, CA1
nTPM: 75.4
2749 Male, age 80, left hemisphere 78.0
1873 Female, age 85, both hemispheres 77.5
2527 Male, age 74, both hemispheres 77.4
2045 Male, age 76, both hemispheres 75.1
2082 Female, age 91, right hemisphere 68.7
Hippocampus, CA2
nTPM: 74.4
1892 Male, age 76, both hemispheres 79.8
2249 Male, age 74, both hemispheres 79.7
1940 Female, age 85, left hemisphere 75.3
2437 Female, age 94, left hemisphere 72.3
1963 Male, age 80, left hemisphere 71.5
2113 Female, age 91, right hemisphere 67.9
Hippocampus, CA3
nTPM: 73.2
2436 Male, age 74, both hemispheres 80.4
1891 Female, age 85, both hemispheres 74.4
1867 Male, age 76, both hemispheres 73.8
2137 Male, age 80, left hemisphere 72.1
2620 Female, age 94, left hemisphere 69.8
2861 Female, age 67, both hemispheres 68.4
Parahippocampal cortex
nTPM: 72.8
1850 Male, age 80, both hemispheres 76.3
1933 Female, age 85, both hemispheres 74.6
2245 Female, age 91, both hemispheres 74.0
2018 Male, age 76, both hemispheres 73.8
2250 Female, age 67, right hemisphere 73.2
2692 Male, age 74, both hemispheres 72.5
2693 Female, age 94, both hemispheres 71.9
1990 Female, age 91, right hemisphere 71.0
2532 Female, age 72, left hemisphere 71.0
2622 Female, age 67, right hemisphere 69.4
Perirhinal gyrus
nTPM: 73.9
1847 Female, age 91, left hemisphere 75.5
1841 Female, age 85, right hemisphere 75.2
1794 Male, age 80, right hemisphere 74.6
2521 Female, age 94, right hemisphere 73.3
2848 Male, age 76, right hemisphere 70.7
Subiculum
nTPM: 72.9
1977 Female, age 85, both hemispheres 75.0
2042 Male, age 76, both hemispheres 75.0
2438 Female, age 94, left hemisphere 73.8
1901 Male, age 80, both hemispheres 73.5
2619 Male, age 74, both hemispheres 70.8
2729 Female, age 91, right hemisphere 69.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.0
Samples: 197

Max nTPM: 204.6
Min nTPM: 43.7
Std nTPM: 20.3
Median nTPM: 108.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 204.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 179.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 169.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 151.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 150.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 150.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 149.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 149.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 146.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 145.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 144.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 164.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 164.6
FF:10169-103B7 60 years, female 198.8
FF:10153-102I9 76 years, female 130.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.5
Samples: 4

Max nTPM: 53.6
Min nTPM: 31.9
Sample A Female 53.6
Sample B Female 38.6
Sample C Male 41.8
Sample D Male 31.9
Entorhinal cortex
nTPM: 36.9
Samples: 4

Max nTPM: 43.1
Min nTPM: 29.0
Sample A Female 38.2
Sample B Female 43.1
Sample C Male 37.3
Sample D Male 29.0
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 47.0
Min nTPM: 30.1
Sample A Female 47.0
Sample B Female 35.5
Sample C Male 30.1
Sample D Male 31.3
Ventral hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 42.3
Min nTPM: 28.5
Sample A Female 37.9
Sample B Female 28.5
Sample C Male 42.3
Sample D Male 34.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 305.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 266.0
Samples: 4

Max nTPM: 278.5
Min nTPM: 252.9
Sample A Male 252.9
Sample B Male 266.5
Sample C Female 278.5
Sample D Female 265.9
Hippocampal formation
nTPM: 305.2
Samples: 4

Max nTPM: 350.5
Min nTPM: 268.4
Sample A Male 350.5
Sample B Male 268.4
Sample C Female 316.1
Sample D Female 285.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
69262338 Antisense, RP_050303_02_B08, Mouse strain C57BL/6J (56 days, male) 11.6

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