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SLC4A3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.7 nTPM
HPA:31.7 nTPM
GTEx:35.8 nTPM
FANTOM5:50.8 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:11.1 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.7
Sample id Sample description nTPM
Hippocampus
nTPM: 29.2
2621 Female, age 67, right hemisphere 36.8
2148 Female, age 91, left hemisphere 32.1
1898 Male, age 80, left hemisphere 29.3
2529 Female, age 94, left hemisphere 28.4
1855 Male, age 76, left hemisphere 27.2
1911 Female, age 85, right hemisphere 21.7
Dentate gyrus
nTPM: 28.5
2531 Female, age 67, both hemispheres 35.8
1927 Female, age 91, both hemispheres 33.5
2528 Male, age 74, both hemispheres 27.6
2530 Female, age 94, left hemisphere 26.6
2010 Male, age 76, both hemispheres 23.7
2246 Female, age 85, both hemispheres 23.6
Entorhinal gyrus
nTPM: 21.1
2764 Male, age 80, right hemisphere 26.6
2686 Male, age 75, right hemisphere 23.8
2613 Female, age 94, left hemisphere 22.9
1787 Male, age 76, left hemisphere 21.8
1938 Female, age 85, left hemisphere 17.1
2117 Female, age 91, right hemisphere 14.5
Hippocampus, CA1
nTPM: 31.5
2749 Male, age 80, left hemisphere 42.7
2082 Female, age 91, right hemisphere 33.8
2527 Male, age 74, both hemispheres 31.9
2045 Male, age 76, both hemispheres 25.2
1873 Female, age 85, both hemispheres 23.7
Hippocampus, CA2
nTPM: 28.4
1963 Male, age 80, left hemisphere 34.8
2437 Female, age 94, left hemisphere 32.4
2113 Female, age 91, right hemisphere 29.9
1892 Male, age 76, both hemispheres 28.8
2249 Male, age 74, both hemispheres 22.7
1940 Female, age 85, left hemisphere 21.7
Hippocampus, CA3
nTPM: 31.7
2861 Female, age 67, both hemispheres 45.0
2137 Male, age 80, left hemisphere 40.6
2620 Female, age 94, left hemisphere 39.5
1867 Male, age 76, both hemispheres 25.0
2436 Male, age 74, both hemispheres 24.6
1891 Female, age 85, both hemispheres 15.7
Parahippocampal cortex
nTPM: 23.2
2245 Female, age 91, both hemispheres 36.5
2693 Female, age 94, both hemispheres 27.1
2250 Female, age 67, right hemisphere 26.7
2622 Female, age 67, right hemisphere 26.3
1933 Female, age 85, both hemispheres 21.8
2018 Male, age 76, both hemispheres 21.1
1990 Female, age 91, right hemisphere 20.2
1850 Male, age 80, both hemispheres 18.9
2532 Female, age 72, left hemisphere 17.8
2692 Male, age 74, both hemispheres 15.8
Perirhinal gyrus
nTPM: 26.6
2521 Female, age 94, right hemisphere 38.0
1847 Female, age 91, left hemisphere 33.3
1794 Male, age 80, right hemisphere 24.3
2848 Male, age 76, right hemisphere 20.1
1841 Female, age 85, right hemisphere 17.2
Subiculum
nTPM: 20.1
2729 Female, age 91, right hemisphere 23.9
2619 Male, age 74, both hemispheres 23.4
1901 Male, age 80, both hemispheres 22.4
1977 Female, age 85, both hemispheres 19.8
2438 Female, age 94, left hemisphere 16.1
2042 Male, age 76, both hemispheres 15.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.8
Samples: 197

Max nTPM: 112.5
Min nTPM: 4.4
Std nTPM: 16.9
Median nTPM: 36.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 112.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 79.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 71.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 71.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 69.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 64.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 64.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 64.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 63.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 62.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.8
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 34.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 17.4
Min nTPM: 12.4
Sample A Female 17.4
Sample B Female 16.8
Sample C Male 14.2
Sample D Male 12.4
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 25.0
Min nTPM: 18.2
Sample A Female 24.4
Sample B Female 20.4
Sample C Male 25.0
Sample D Male 18.2
Subiculum
nTPM: 21.2
Samples: 4

Max nTPM: 28.7
Min nTPM: 17.2
Sample A Female 28.7
Sample B Female 18.6
Sample C Male 20.1
Sample D Male 17.2
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 27.9
Min nTPM: 13.4
Sample A Female 18.2
Sample B Female 13.4
Sample C Male 27.9
Sample D Male 14.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 16.2
Min nTPM: 7.4
Sample A Male 9.4
Sample B Male 11.4
Sample C Female 7.4
Sample D Female 16.2
Hippocampal formation
nTPM: 7.1
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.9
Sample A Male 8.3
Sample B Male 7.8
Sample C Female 5.9
Sample D Female 6.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69874000 Antisense, RP_050512_02_D10, Mouse strain C57BL/6J (56 days, male) 4.5
74300723 Antisense, RP_051219_03_F08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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