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EEF1B2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:181.1 nTPM
HPA:181.1 nTPM
GTEx:472.6 nTPM
FANTOM5:132.1 Scaled Tags Per Million
Pig:174.9 nTPM
Mouse:146.5 nTPM
Allen mouse:5.7 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 181.1
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 175.7
2666 Male, age 74, left hemisphere 182.5
2411 Female, age 72, unknown 177.6
2019 Male, age 18, unknown 177.4
1870 Female, age 42, unknown 176.4
2219 Male, age 76, both hemispheres 175.9
1833 Male, age 53, unknown 174.2
2828 Female, age 72, unknown 173.7
1830 Male, age 51, unknown 173.5
1827 Male, age 72, unknown 173.4
2586 Male, age 75, left hemisphere 172.6
Dorsal raphe nucleus
nTPM: 174.3
2298 Female, age 72, unknown 177.2
2750 Male, age 76, both hemispheres 175.9
1828 Male, age 53, unknown 175.2
2047 Male, age 72, unknown 172.0
2016 Female, age 72, unknown 171.2
Inferior colliculus
nTPM: 172.6
1890 Male, age 53, unknown 174.5
2097 Female, age 72, unknown 173.7
1848 Female, age 42, unknown 171.4
2849 Male, age 72, unknown 171.0
Median raphe nucleus
nTPM: 174.9
2220 Male, age 76, midline 174.9
Pedunculopontine tegmental nucleus
nTPM: 178.5
2338 Male, age 61, both hemispheres 182.1
2334 Male, age 80, both hemispheres 181.8
1921 Female, age 85, both hemispheres 171.4
Periaquaductal grey, anterior
nTPM: 174.7
2502 Female, age 75, unknown 180.9
1947 Male, age 18, unknown 171.9
1795 Male, age 51, unknown 171.4
Periaquaductal grey, dorsal
nTPM: 171.1
2464 Female, age 72, unknown 173.6
1831 Male, age 72, unknown 171.3
1840 Male, age 53, unknown 170.8
2850 Male, age 76, both hemispheres 168.8
Periaquaductal grey, lateral
nTPM: 169.0
2053 Male, age 18, unknown 170.7
2140 Male, age 76, both hemispheres 168.6
2272 Male, age 74, both hemispheres 167.6
Pretectal area
nTPM: 172.7
1815 Male, age 53, unknown 176.7
1817 Female, age 42, unknown 176.6
2316 Male, age 76, right hemisphere 176.2
2007 Male, age 72, unknown 175.0
1816 Male, age 51, unknown 174.8
2224 Female, age 72, unknown 173.8
2825 Male, age 18, unknown 173.6
1944 Female, age 72, unknown 171.4
2667 Female, age 75, unknown 168.5
2407 Male, age 75, both hemispheres 167.1
2273 Male, age 74, both hemispheres 166.4
Red nucleus
nTPM: 179.7
2503 Female, age 72, unknown 188.8
2588 Male, age 74, left hemisphere 183.5
1821 Female, age 72, unknown 183.4
2725 Female, age 75, unknown 182.9
1865 Male, age 51, unknown 182.2
1904 Male, age 53, unknown 180.3
2227 Male, age 72, unknown 177.7
2769 Male, age 72, unknown 177.1
1954 Female, age 42, unknown 176.6
2785 Male, age 18, unknown 176.4
2584 Male, age 75, left hemisphere 175.5
2823 Male, age 76, right hemisphere 172.1
Substantia nigra
nTPM: 181.1
2409 Female, age 72, unknown 188.4
2241 Male, age 72, unknown 187.4
1851 Male, age 51, unknown 186.9
2665 Male, age 74, both hemispheres 184.4
2699 Male, age 18, unknown 182.9
1916 Female, age 42, unknown 180.9
2590 Female, age 75, unknown 178.0
1941 Male, age 53, unknown 177.8
1889 Female, age 72, unknown 175.7
2583 Male, age 75, right hemisphere 168.9
Superior colliculus
nTPM: 173.7
2587 Male, age 74, left hemisphere 183.4
1913 Female, age 42, unknown 176.0
1995 Male, age 72, unknown 175.4
1895 Male, age 76, right hemisphere 173.2
2087 Female, age 72, unknown 173.2
1839 Male, age 51, unknown 173.1
2261 Male, age 18, unknown 172.1
2668 Female, age 75, unknown 171.7
1796 Male, age 53, unknown 171.3
2664 Male, age 75, both hemispheres 167.7
Ventral tegmental area
nTPM: 178.4
1915 Female, age 42, unknown 182.4
2410 Female, age 72, unknown 182.2
2223 Female, age 72, unknown 179.0
2021 Male, age 53, unknown 176.8
2218 Male, age 76, both hemispheres 176.0
1942 Male, age 51, unknown 174.3

MIDBRAIN - GTEx RNA-seqi
Average nTPM 472.6
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 472.6
Samples: 139

Max nTPM: 1306.9
Min nTPM: 249.5
Std nTPM: 176.7
Median nTPM: 430.5
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 1306.9
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 1103.8
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 1078.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 1045.5
GTEX-R55E-0011-R2A-SM-EYYV9 20-29 years, male 843.7
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 826.5
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 768.3
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 743.2
GTEX-1EU9M-0011-R2b-SM-9QEH7 60-69 years, male 739.2
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 733.0
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 731.2
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 132.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 132.1
FF:10158-103A5 76 years, female 132.1

MIDBRAIN - Pig RNA-seqi
Average nTPM 174.9
Pig sample Sample description nTPM
Midbrain
nTPM: 162.9
Samples: 4

Max nTPM: 197.9
Min nTPM: 139.5
Sample A Female 197.9
Sample B Female 171.9
Sample C Male 139.5
Sample D Male 142.2
Periaqueductal gray
nTPM: 141.9
Samples: 3

Max nTPM: 156.8
Min nTPM: 129.8
Sample B Female 139.1
Sample C Male 156.8
Sample D Male 129.8
Substantia nigra
nTPM: 166.5
Samples: 4

Max nTPM: 219.7
Min nTPM: 127.2
Sample A Female 219.7
Sample B Female 165.3
Sample C Male 153.8
Sample D Male 127.2
Superior colliculi
nTPM: 174.9
Samples: 4

Max nTPM: 211.4
Min nTPM: 151.4
Sample A Female 211.4
Sample B Female 175.9
Sample C Male 161.0
Sample D Male 151.4

MIDBRAIN - Mouse RNA-seqi
Average nTPM 146.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 146.5
Samples: 4

Max nTPM: 157.0
Min nTPM: 134.9
Sample A Male 155.5
Sample B Male 138.6
Sample C Female 134.9
Sample D Female 157.0

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 5.7
75934526 Antisense, RP_060530_01_E02, Mouse strain C57BL/6J (56 days, male) 9.0
68443148 Antisense, RP_050111_01_D10, Mouse strain C57BL/6J (56 days, male) 2.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.