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ACVR1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:10.2 nTPM
FANTOM5:23.5 Scaled Tags Per Million
Pig:19.9 nTPM
Mouse:12.7 nTPM
Allen mouse:0.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 11.9
2666 Male, age 74, left hemisphere 16.7
2828 Female, age 72, unknown 12.8
2586 Male, age 75, left hemisphere 12.6
1827 Male, age 72, unknown 12.0
1870 Female, age 42, unknown 11.7
1830 Male, age 51, unknown 11.4
1833 Male, age 53, unknown 11.1
2411 Female, age 72, unknown 10.8
2019 Male, age 18, unknown 10.7
2219 Male, age 76, both hemispheres 9.7
Dorsal raphe nucleus
nTPM: 11.2
1828 Male, age 53, unknown 13.0
2047 Male, age 72, unknown 11.5
2750 Male, age 76, both hemispheres 10.8
2016 Female, age 72, unknown 10.7
2298 Female, age 72, unknown 9.8
Inferior colliculus
nTPM: 11.5
2097 Female, age 72, unknown 12.4
1890 Male, age 53, unknown 12.0
1848 Female, age 42, unknown 11.2
2849 Male, age 72, unknown 10.3
Median raphe nucleus
nTPM: 10.5
2220 Male, age 76, midline 10.5
Pedunculopontine tegmental nucleus
nTPM: 11.1
2338 Male, age 61, both hemispheres 11.6
1921 Female, age 85, both hemispheres 10.9
2334 Male, age 80, both hemispheres 10.6
Periaquaductal grey, anterior
nTPM: 12.0
1947 Male, age 18, unknown 13.8
1795 Male, age 51, unknown 11.5
2502 Female, age 75, unknown 10.8
Periaquaductal grey, dorsal
nTPM: 10.9
2850 Male, age 76, both hemispheres 11.9
1831 Male, age 72, unknown 11.6
2464 Female, age 72, unknown 10.2
1840 Male, age 53, unknown 10.0
Periaquaductal grey, lateral
nTPM: 11.7
2140 Male, age 76, both hemispheres 13.0
2053 Male, age 18, unknown 11.7
2272 Male, age 74, both hemispheres 10.5
Pretectal area
nTPM: 11.2
1944 Female, age 72, unknown 13.3
1816 Male, age 51, unknown 12.9
1817 Female, age 42, unknown 12.9
2007 Male, age 72, unknown 12.7
1815 Male, age 53, unknown 12.1
2667 Female, age 75, unknown 11.1
2825 Male, age 18, unknown 10.2
2224 Female, age 72, unknown 9.6
2316 Male, age 76, right hemisphere 9.6
2273 Male, age 74, both hemispheres 9.5
2407 Male, age 75, both hemispheres 9.2
Red nucleus
nTPM: 12.9
1954 Female, age 42, unknown 14.9
2588 Male, age 74, left hemisphere 14.1
1821 Female, age 72, unknown 13.9
2769 Male, age 72, unknown 13.8
1865 Male, age 51, unknown 12.9
1904 Male, age 53, unknown 12.7
2584 Male, age 75, left hemisphere 12.7
2503 Female, age 72, unknown 12.6
2725 Female, age 75, unknown 12.0
2823 Male, age 76, right hemisphere 12.0
2227 Male, age 72, unknown 11.9
2785 Male, age 18, unknown 10.9
Substantia nigra
nTPM: 12.1
2665 Male, age 74, both hemispheres 16.6
1916 Female, age 42, unknown 13.0
2590 Female, age 75, unknown 12.6
1941 Male, age 53, unknown 12.5
1851 Male, age 51, unknown 12.4
1889 Female, age 72, unknown 12.1
2699 Male, age 18, unknown 11.7
2583 Male, age 75, right hemisphere 10.8
2241 Male, age 72, unknown 10.6
2409 Female, age 72, unknown 8.2
Superior colliculus
nTPM: 11.3
2261 Male, age 18, unknown 14.0
2668 Female, age 75, unknown 12.6
2087 Female, age 72, unknown 12.3
2587 Male, age 74, left hemisphere 11.3
1913 Female, age 42, unknown 11.0
1995 Male, age 72, unknown 10.9
1895 Male, age 76, right hemisphere 10.8
2664 Male, age 75, both hemispheres 10.4
1796 Male, age 53, unknown 10.3
1839 Male, age 51, unknown 9.6
Ventral tegmental area
nTPM: 11.0
2218 Male, age 76, both hemispheres 12.0
2223 Female, age 72, unknown 11.7
1942 Male, age 51, unknown 11.3
1915 Female, age 42, unknown 10.8
2410 Female, age 72, unknown 10.3
2021 Male, age 53, unknown 9.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 10.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 10.2
Samples: 139

Max nTPM: 25.8
Min nTPM: 4.5
Std nTPM: 3.2
Median nTPM: 9.7
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 25.8
GTEX-1J1OQ-0011-R2b-SM-ARU88 40-49 years, female 20.1
GTEX-1IL2U-0011-R2a-SM-ARU6V 60-69 years, male 19.1
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 18.5
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 18.1
GTEX-14BIN-0011-R2a-SM-5S2RJ 50-59 years, female 17.6
GTEX-11UD1-0011-R2b-SM-5BC6O 40-49 years, female 16.4
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 15.7
GTEX-1I1GV-0011-R2a-SM-ARZLF 60-69 years, male 15.7
GTEX-13X6K-0011-R2b-SM-5P9K3 60-69 years, female 15.0
GTEX-11WQC-0011-R2a-SM-DO927 60-69 years, male 14.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 23.5
FF:10158-103A5 76 years, female 23.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 19.9
Pig sample Sample description nTPM
Midbrain
nTPM: 16.3
Samples: 4

Max nTPM: 20.5
Min nTPM: 12.0
Sample A Female 19.8
Sample B Female 12.8
Sample C Male 20.5
Sample D Male 12.0
Periaqueductal gray
nTPM: 13.7
Samples: 3

Max nTPM: 14.1
Min nTPM: 13.4
Sample B Female 13.4
Sample C Male 13.6
Sample D Male 14.1
Substantia nigra
nTPM: 15.9
Samples: 4

Max nTPM: 17.5
Min nTPM: 13.9
Sample A Female 17.5
Sample B Female 17.5
Sample C Male 14.5
Sample D Male 13.9
Superior colliculi
nTPM: 19.9
Samples: 4

Max nTPM: 27.8
Min nTPM: 14.5
Sample A Female 17.9
Sample B Female 27.8
Sample C Male 19.5
Sample D Male 14.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 12.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 12.7
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.8
Sample A Male 12.2
Sample B Male 13.0
Sample C Female 13.8
Sample D Female 11.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.2
69514714 Antisense, RP_050419_03_H08, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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