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SNX17
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.2 nTPM
HPA:32.2 nTPM
GTEx:43.7 nTPM
FANTOM5:47.6 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:77.7 nTPM
Allen mouse:3.6 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 32.2
Sample id Sample description nTPM
Amygdala
nTPM: 32.2
2814 Male, age 76, right hemisphere 35.0
2514 Male, age 75, right hemisphere 32.4
2517 Female, age 94, left hemisphere 31.7
2695 Female, age 67, right hemisphere 31.6
1987 Female, age 91, left hemisphere 30.4
Basal amygdala
nTPM: 29.5
2609 Male, age 75, right hemisphere 35.2
2110 Male, age 80, left hemisphere 29.9
1955 Male, age 76, both hemispheres 29.2
2685 Female, age 94, left hemisphere 28.7
2243 Female, age 91, right hemisphere 27.6
2827 Female, age 67, right hemisphere 26.6
Central amygdala
nTPM: 31.1
1905 Male, age 76, both hemispheres 34.3
2826 Female, age 94, left hemisphere 33.0
2515 Male, age 75, right hemisphere 32.0
2239 Male, age 80, left hemisphere 28.6
2701 Female, age 91, right hemisphere 27.7
Corticomedial amygdala
nTPM: 28.4
2428 Male, age 75, right hemisphere 32.9
2829 Male, age 80, left hemisphere 30.2
2242 Female, age 91, right hemisphere 29.2
2240 Male, age 76, both hemispheres 27.8
2429 Female, age 94, left hemisphere 26.4
2535 Female, age 67, right hemisphere 24.0
Lateral amygdala
nTPM: 30.5
1883 Male, age 76, both hemispheres 34.1
2534 Female, age 94, left hemisphere 32.6
2516 Male, age 75, right hemisphere 32.1
2256 Male, age 80, left hemisphere 28.9
2830 Female, age 67, right hemisphere 27.9
2255 Female, age 91, right hemisphere 27.7
Stria terminalis, bed nucleus
nTPM: 28.6
1974 Female, age 91, both hemispheres 32.0
2486 Female, age 94, both hemispheres 27.4
2201 Male, age 74, unknown 26.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 43.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 43.7
Samples: 152

Max nTPM: 72.7
Min nTPM: 24.5
Std nTPM: 8.5
Median nTPM: 44.0
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 72.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 71.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 68.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 65.9
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 64.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 62.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 60.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 59.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 57.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 56.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 56.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 47.6
FF:10151-102I7 76 years, female 47.6

AMYGDALA - Pig RNA-seqi
Average nTPM 22.8
Pig sample Sample description nTPM
Amygdala
nTPM: 22.7
Samples: 4

Max nTPM: 30.2
Min nTPM: 19.3
Sample A Female 30.2
Sample B Female 21.1
Sample C Male 19.3
Sample D Male 20.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 77.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 77.7
Samples: 4

Max nTPM: 82.6
Min nTPM: 75.5
Sample A Male 82.6
Sample B Male 75.5
Sample C Female 76.6
Sample D Female 75.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 3.6
68910969 Antisense, RP_050118_01_D06, Mouse strain C57BL/6J (56 days, male) 3.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.