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APC2
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.1 nTPM
HPA:37.1 nTPM
GTEx:35.7 nTPM
FANTOM5:56.7 Scaled Tags Per Million
Pig:30.0 nTPM
Mouse:31.2 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.1
Sample id Sample description nTPM
Hippocampus
nTPM: 32.6
2148 Female, age 91, left hemisphere 39.9
1898 Male, age 80, left hemisphere 37.5
1911 Female, age 85, right hemisphere 34.1
2621 Female, age 67, right hemisphere 32.2
2529 Female, age 94, left hemisphere 26.7
1855 Male, age 76, left hemisphere 25.2
Dentate gyrus
nTPM: 37.1
2530 Female, age 94, left hemisphere 67.4
2528 Male, age 74, both hemispheres 55.7
2010 Male, age 76, both hemispheres 28.4
2531 Female, age 67, both hemispheres 27.5
1927 Female, age 91, both hemispheres 25.6
2246 Female, age 85, both hemispheres 17.7
Entorhinal gyrus
nTPM: 34.1
2613 Female, age 94, left hemisphere 61.3
2764 Male, age 80, right hemisphere 37.7
2117 Female, age 91, right hemisphere 32.7
2686 Male, age 75, right hemisphere 28.7
1787 Male, age 76, left hemisphere 24.4
1938 Female, age 85, left hemisphere 19.9
Hippocampus, CA1
nTPM: 24.8
2749 Male, age 80, left hemisphere 40.2
1873 Female, age 85, both hemispheres 36.2
2527 Male, age 74, both hemispheres 35.0
2082 Female, age 91, right hemisphere 11.8
2045 Male, age 76, both hemispheres 0.8
Hippocampus, CA2
nTPM: 29.2
1963 Male, age 80, left hemisphere 40.3
2437 Female, age 94, left hemisphere 37.4
2249 Male, age 74, both hemispheres 32.4
1940 Female, age 85, left hemisphere 27.7
1892 Male, age 76, both hemispheres 20.8
2113 Female, age 91, right hemisphere 17.0
Hippocampus, CA3
nTPM: 26.3
2861 Female, age 67, both hemispheres 61.8
2620 Female, age 94, left hemisphere 34.0
1891 Female, age 85, both hemispheres 23.8
2137 Male, age 80, left hemisphere 23.0
1867 Male, age 76, both hemispheres 10.8
2436 Male, age 74, both hemispheres 4.5
Parahippocampal cortex
nTPM: 22.4
2622 Female, age 67, right hemisphere 44.4
2692 Male, age 74, both hemispheres 35.4
2245 Female, age 91, both hemispheres 25.2
2693 Female, age 94, both hemispheres 20.7
1990 Female, age 91, right hemisphere 20.2
2532 Female, age 72, left hemisphere 19.6
1933 Female, age 85, both hemispheres 19.3
2250 Female, age 67, right hemisphere 16.2
1850 Male, age 80, both hemispheres 11.9
2018 Male, age 76, both hemispheres 10.5
Perirhinal gyrus
nTPM: 12.4
2521 Female, age 94, right hemisphere 21.4
1794 Male, age 80, right hemisphere 18.4
1847 Female, age 91, left hemisphere 8.7
1841 Female, age 85, right hemisphere 6.9
2848 Male, age 76, right hemisphere 6.8
Subiculum
nTPM: 26.9
2619 Male, age 74, both hemispheres 38.8
2729 Female, age 91, right hemisphere 34.5
1901 Male, age 80, both hemispheres 28.3
2042 Male, age 76, both hemispheres 26.7
1977 Female, age 85, both hemispheres 18.3
2438 Female, age 94, left hemisphere 15.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.7
Samples: 197

Max nTPM: 57.7
Min nTPM: 8.5
Std nTPM: 9.0
Median nTPM: 36.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 57.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 56.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 54.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 53.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 52.9
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 52.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 51.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 51.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 50.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 49.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 49.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.7
FF:10153-102I9 76 years, female 72.6
FF:10169-103B7 60 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 31.5
Min nTPM: 24.0
Sample A Female 31.5
Sample B Female 31.0
Sample C Male 24.3
Sample D Male 24.0
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 32.2
Min nTPM: 26.4
Sample A Female 31.2
Sample B Female 26.4
Sample C Male 32.2
Sample D Male 30.2
Subiculum
nTPM: 26.7
Samples: 4

Max nTPM: 33.6
Min nTPM: 22.6
Sample A Female 33.6
Sample B Female 22.6
Sample C Male 27.8
Sample D Male 22.8
Ventral hippocampus
nTPM: 28.5
Samples: 4

Max nTPM: 36.0
Min nTPM: 20.8
Sample A Female 22.4
Sample B Female 20.8
Sample C Male 34.7
Sample D Male 36.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 39.2
Min nTPM: 27.1
Sample A Male 30.8
Sample B Male 27.7
Sample C Female 27.1
Sample D Female 39.2
Hippocampal formation
nTPM: 22.2
Samples: 4

Max nTPM: 27.2
Min nTPM: 19.1
Sample A Male 19.1
Sample B Male 27.2
Sample C Female 21.6
Sample D Female 20.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
69526731 Antisense, RP_050421_01_E06, Mouse strain C57BL/6J (56 days, male) 2.3

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