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NDUFS7
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:85.5 nTPM
HPA:85.5 nTPM
GTEx:83.1 nTPM
FANTOM5:118.3 Scaled Tags Per Million
Pig:85.3 nTPM
Mouse:79.2 nTPM
Allen mouse:12.9 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 85.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 76.2
2411 Female, age 72, unknown 95.1
2019 Male, age 18, unknown 82.1
1870 Female, age 42, unknown 78.2
1827 Male, age 72, unknown 77.3
2828 Female, age 72, unknown 77.0
1833 Male, age 53, unknown 76.7
1830 Male, age 51, unknown 74.4
2219 Male, age 76, both hemispheres 72.4
2586 Male, age 75, left hemisphere 68.8
2666 Male, age 74, left hemisphere 59.9
Dorsal raphe nucleus
nTPM: 78.9
2298 Female, age 72, unknown 93.1
2750 Male, age 76, both hemispheres 88.4
1828 Male, age 53, unknown 74.5
2047 Male, age 72, unknown 71.1
2016 Female, age 72, unknown 67.5
Inferior colliculus
nTPM: 72.5
2097 Female, age 72, unknown 84.6
1848 Female, age 42, unknown 71.6
1890 Male, age 53, unknown 71.4
2849 Male, age 72, unknown 62.5
Median raphe nucleus
nTPM: 74.9
2220 Male, age 76, midline 74.9
Pedunculopontine tegmental nucleus
nTPM: 77.7
2334 Male, age 80, both hemispheres 82.8
1921 Female, age 85, both hemispheres 80.3
2338 Male, age 61, both hemispheres 69.9
Periaquaductal grey, anterior
nTPM: 80.3
1795 Male, age 51, unknown 82.0
1947 Male, age 18, unknown 80.9
2502 Female, age 75, unknown 78.0
Periaquaductal grey, dorsal
nTPM: 62.3
2464 Female, age 72, unknown 68.3
1831 Male, age 72, unknown 62.0
1840 Male, age 53, unknown 61.1
2850 Male, age 76, both hemispheres 57.9
Periaquaductal grey, lateral
nTPM: 68.2
2272 Male, age 74, both hemispheres 78.0
2053 Male, age 18, unknown 66.1
2140 Male, age 76, both hemispheres 60.5
Pretectal area
nTPM: 77.8
2007 Male, age 72, unknown 91.1
2667 Female, age 75, unknown 87.6
1817 Female, age 42, unknown 86.2
2224 Female, age 72, unknown 82.1
1944 Female, age 72, unknown 79.9
2273 Male, age 74, both hemispheres 78.8
1816 Male, age 51, unknown 78.6
1815 Male, age 53, unknown 77.4
2316 Male, age 76, right hemisphere 73.8
2825 Male, age 18, unknown 67.9
2407 Male, age 75, both hemispheres 52.6
Red nucleus
nTPM: 85.5
2503 Female, age 72, unknown 99.7
1821 Female, age 72, unknown 92.6
2227 Male, age 72, unknown 92.0
1904 Male, age 53, unknown 91.3
2785 Male, age 18, unknown 89.3
2769 Male, age 72, unknown 89.2
2725 Female, age 75, unknown 84.7
1954 Female, age 42, unknown 81.8
2823 Male, age 76, right hemisphere 81.6
1865 Male, age 51, unknown 81.1
2588 Male, age 74, left hemisphere 78.5
2584 Male, age 75, left hemisphere 64.2
Substantia nigra
nTPM: 74.4
1916 Female, age 42, unknown 90.6
1889 Female, age 72, unknown 87.4
1851 Male, age 51, unknown 83.7
1941 Male, age 53, unknown 79.0
2583 Male, age 75, right hemisphere 73.9
2590 Female, age 75, unknown 71.8
2699 Male, age 18, unknown 70.4
2241 Male, age 72, unknown 65.7
2665 Male, age 74, both hemispheres 63.0
2409 Female, age 72, unknown 58.9
Superior colliculus
nTPM: 75.1
1913 Female, age 42, unknown 85.4
1796 Male, age 53, unknown 82.8
2087 Female, age 72, unknown 79.4
2261 Male, age 18, unknown 78.5
1995 Male, age 72, unknown 78.0
2587 Male, age 74, left hemisphere 76.7
1895 Male, age 76, right hemisphere 72.6
1839 Male, age 51, unknown 71.3
2668 Female, age 75, unknown 69.0
2664 Male, age 75, both hemispheres 57.1
Ventral tegmental area
nTPM: 80.6
2410 Female, age 72, unknown 97.8
2218 Male, age 76, both hemispheres 88.9
1915 Female, age 42, unknown 82.8
2223 Female, age 72, unknown 74.9
1942 Male, age 51, unknown 73.8
2021 Male, age 53, unknown 65.3

MIDBRAIN - GTEx RNA-seqi
Average nTPM 83.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 83.1
Samples: 139

Max nTPM: 174.2
Min nTPM: 28.7
Std nTPM: 24.8
Median nTPM: 80.0
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 174.2
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 171.1
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 168.4
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 150.2
GTEX-1IY9M-0011-R2a-SM-D4P29 60-69 years, male 145.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 144.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 141.2
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 139.4
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 127.6
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 120.2
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 117.1
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 118.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 118.3
FF:10158-103A5 76 years, female 118.3

MIDBRAIN - Pig RNA-seqi
Average nTPM 85.3
Pig sample Sample description nTPM
Midbrain
nTPM: 76.2
Samples: 4

Max nTPM: 88.8
Min nTPM: 62.3
Sample A Female 88.8
Sample B Female 62.3
Sample C Male 86.2
Sample D Male 67.6
Periaqueductal gray
nTPM: 52.1
Samples: 3

Max nTPM: 56.7
Min nTPM: 44.1
Sample B Female 55.4
Sample C Male 56.7
Sample D Male 44.1
Substantia nigra
nTPM: 64.8
Samples: 4

Max nTPM: 91.8
Min nTPM: 51.4
Sample A Female 91.8
Sample B Female 51.5
Sample C Male 64.3
Sample D Male 51.4
Superior colliculi
nTPM: 85.3
Samples: 4

Max nTPM: 106.2
Min nTPM: 62.7
Sample A Female 106.2
Sample B Female 62.7
Sample C Male 103.5
Sample D Male 68.7

MIDBRAIN - Mouse RNA-seqi
Average nTPM 79.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 79.2
Samples: 4

Max nTPM: 114.1
Min nTPM: 56.4
Sample A Male 114.1
Sample B Male 69.4
Sample C Female 56.4
Sample D Female 76.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 12.9
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 12.9
70526029 Antisense, RP_050317_04_H04, Mouse strain C57BL/6J (56 days, male) 12.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.