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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.2 nTPM
HPA:15.2 nTPM
GTEx:15.9 nTPM
FANTOM5:63.7 Scaled Tags Per Million
Pig:25.4 nTPM
Mouse:46.5 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043366
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.2
1898 Male, age 80, left hemisphere 15.1
2529 Female, age 94, left hemisphere 15.0
1855 Male, age 76, left hemisphere 14.8
1911 Female, age 85, right hemisphere 14.7
2148 Female, age 91, left hemisphere 13.4
2621 Female, age 67, right hemisphere 12.3
Dentate gyrus
nTPM: 14.4
2010 Male, age 76, both hemispheres 16.3
2246 Female, age 85, both hemispheres 15.7
1927 Female, age 91, both hemispheres 15.4
2531 Female, age 67, both hemispheres 13.4
2530 Female, age 94, left hemisphere 13.1
2528 Male, age 74, both hemispheres 12.7
Entorhinal gyrus
nTPM: 13.4
1938 Female, age 85, left hemisphere 15.3
2117 Female, age 91, right hemisphere 13.6
2764 Male, age 80, right hemisphere 13.3
1787 Male, age 76, left hemisphere 12.8
2686 Male, age 75, right hemisphere 12.8
2613 Female, age 94, left hemisphere 12.4
Hippocampus, CA1
nTPM: 15.2
1873 Female, age 85, both hemispheres 17.3
2749 Male, age 80, left hemisphere 17.3
2082 Female, age 91, right hemisphere 14.7
2045 Male, age 76, both hemispheres 14.5
2527 Male, age 74, both hemispheres 12.2
Hippocampus, CA2
nTPM: 14.0
1963 Male, age 80, left hemisphere 17.0
1892 Male, age 76, both hemispheres 15.1
2113 Female, age 91, right hemisphere 14.3
2249 Male, age 74, both hemispheres 13.3
1940 Female, age 85, left hemisphere 12.5
2437 Female, age 94, left hemisphere 11.9
Hippocampus, CA3
nTPM: 13.6
1891 Female, age 85, both hemispheres 18.4
2137 Male, age 80, left hemisphere 15.6
1867 Male, age 76, both hemispheres 15.2
2620 Female, age 94, left hemisphere 11.4
2436 Male, age 74, both hemispheres 11.2
2861 Female, age 67, both hemispheres 9.5
Parahippocampal cortex
nTPM: 13.8
1990 Female, age 91, right hemisphere 15.0
2018 Male, age 76, both hemispheres 14.8
1850 Male, age 80, both hemispheres 14.4
1933 Female, age 85, both hemispheres 14.4
2692 Male, age 74, both hemispheres 14.2
2693 Female, age 94, both hemispheres 13.6
2250 Female, age 67, right hemisphere 13.2
2532 Female, age 72, left hemisphere 13.1
2245 Female, age 91, both hemispheres 12.7
2622 Female, age 67, right hemisphere 12.1
Perirhinal gyrus
nTPM: 13.4
1847 Female, age 91, left hemisphere 16.0
2521 Female, age 94, right hemisphere 13.3
1841 Female, age 85, right hemisphere 13.2
2848 Male, age 76, right hemisphere 12.3
1794 Male, age 80, right hemisphere 12.1
Subiculum
nTPM: 14.7
1901 Male, age 80, both hemispheres 17.7
1977 Female, age 85, both hemispheres 16.3
2042 Male, age 76, both hemispheres 15.3
2619 Male, age 74, both hemispheres 13.6
2729 Female, age 91, right hemisphere 13.4
2438 Female, age 94, left hemisphere 11.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 38.4
Min nTPM: 7.8
Std nTPM: 4.4
Median nTPM: 15.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 38.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 33.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 27.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 27.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 25.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 25.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 25.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 24.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 24.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 24.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.7
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 47.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 24.4
Min nTPM: 17.3
Sample A Female 23.2
Sample B Female 24.4
Sample C Male 17.3
Sample D Male 19.4
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 28.6
Min nTPM: 20.3
Sample A Female 27.4
Sample B Female 28.6
Sample C Male 25.3
Sample D Male 20.3
Subiculum
nTPM: 22.4
Samples: 4

Max nTPM: 29.8
Min nTPM: 16.4
Sample A Female 29.8
Sample B Female 22.9
Sample C Male 20.5
Sample D Male 16.4
Ventral hippocampus
nTPM: 21.2
Samples: 4

Max nTPM: 22.5
Min nTPM: 19.3
Sample A Female 19.3
Sample B Female 21.2
Sample C Male 21.6
Sample D Male 22.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.3
Samples: 4

Max nTPM: 38.0
Min nTPM: 29.4
Sample A Male 36.3
Sample B Male 29.4
Sample C Female 38.0
Sample D Female 33.3
Hippocampal formation
nTPM: 46.5
Samples: 4

Max nTPM: 54.6
Min nTPM: 39.1
Sample A Male 42.1
Sample B Male 54.6
Sample C Female 50.3
Sample D Female 39.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
75774680 Antisense, RP_060530_01_D05, Mouse strain C57BL/6J (56 days, male) 9.9
67815542 Antisense, RP_040920_01_G12, Mouse strain C57BL/6J (56 days, male) 5.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.