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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:50.4 nTPM
HPA:50.4 nTPM
GTEx:71.2 nTPM
FANTOM5:56.0 Scaled Tags Per Million
Pig:49.5 nTPM
Mouse:148.6 nTPM
Allen mouse:21.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047147
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.4
Sample id Sample description nTPM
Hippocampus
nTPM: 44.6
2148 Female, age 91, left hemisphere 49.1
1898 Male, age 80, left hemisphere 45.5
2529 Female, age 94, left hemisphere 45.5
1855 Male, age 76, left hemisphere 42.6
1911 Female, age 85, right hemisphere 42.6
2621 Female, age 67, right hemisphere 42.1
Dentate gyrus
nTPM: 43.0
2531 Female, age 67, both hemispheres 48.6
1927 Female, age 91, both hemispheres 47.0
2010 Male, age 76, both hemispheres 44.2
2246 Female, age 85, both hemispheres 42.2
2530 Female, age 94, left hemisphere 38.4
2528 Male, age 74, both hemispheres 37.7
Entorhinal gyrus
nTPM: 50.4
2613 Female, age 94, left hemisphere 58.0
2764 Male, age 80, right hemisphere 53.8
2686 Male, age 75, right hemisphere 51.4
1787 Male, age 76, left hemisphere 50.8
1938 Female, age 85, left hemisphere 48.2
2117 Female, age 91, right hemisphere 40.0
Hippocampus, CA1
nTPM: 45.8
2749 Male, age 80, left hemisphere 55.5
2527 Male, age 74, both hemispheres 46.1
2045 Male, age 76, both hemispheres 42.9
2082 Female, age 91, right hemisphere 42.6
1873 Female, age 85, both hemispheres 41.8
Hippocampus, CA2
nTPM: 43.5
2437 Female, age 94, left hemisphere 46.6
1963 Male, age 80, left hemisphere 46.5
1892 Male, age 76, both hemispheres 45.8
2113 Female, age 91, right hemisphere 45.8
1940 Female, age 85, left hemisphere 40.6
2249 Male, age 74, both hemispheres 35.4
Hippocampus, CA3
nTPM: 45.9
2137 Male, age 80, left hemisphere 53.5
2861 Female, age 67, both hemispheres 52.3
2620 Female, age 94, left hemisphere 47.6
1867 Male, age 76, both hemispheres 46.3
1891 Female, age 85, both hemispheres 40.0
2436 Male, age 74, both hemispheres 35.6
Parahippocampal cortex
nTPM: 46.3
1933 Female, age 85, both hemispheres 49.0
2245 Female, age 91, both hemispheres 48.5
2693 Female, age 94, both hemispheres 48.1
1850 Male, age 80, both hemispheres 47.8
2622 Female, age 67, right hemisphere 47.6
2532 Female, age 72, left hemisphere 46.0
2692 Male, age 74, both hemispheres 45.4
1990 Female, age 91, right hemisphere 44.8
2018 Male, age 76, both hemispheres 43.5
2250 Female, age 67, right hemisphere 42.0
Perirhinal gyrus
nTPM: 49.6
1847 Female, age 91, left hemisphere 56.2
1794 Male, age 80, right hemisphere 52.0
2521 Female, age 94, right hemisphere 51.5
1841 Female, age 85, right hemisphere 44.4
2848 Male, age 76, right hemisphere 43.9
Subiculum
nTPM: 39.7
1977 Female, age 85, both hemispheres 46.5
1901 Male, age 80, both hemispheres 40.6
2042 Male, age 76, both hemispheres 40.5
2619 Male, age 74, both hemispheres 40.0
2729 Female, age 91, right hemisphere 39.1
2438 Female, age 94, left hemisphere 31.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.2
Samples: 197

Max nTPM: 160.5
Min nTPM: 26.6
Std nTPM: 23.7
Median nTPM: 66.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 160.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 141.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 134.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 132.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 129.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 124.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 121.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 120.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 119.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 118.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 118.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.0
FF:10153-102I9 76 years, female 58.8
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.1
Samples: 4

Max nTPM: 58.3
Min nTPM: 35.9
Sample A Female 58.3
Sample B Female 49.2
Sample C Male 44.8
Sample D Male 35.9
Entorhinal cortex
nTPM: 49.5
Samples: 4

Max nTPM: 57.4
Min nTPM: 44.2
Sample A Female 51.0
Sample B Female 45.5
Sample C Male 57.4
Sample D Male 44.2
Subiculum
nTPM: 45.8
Samples: 4

Max nTPM: 61.6
Min nTPM: 36.2
Sample A Female 61.6
Sample B Female 41.2
Sample C Male 44.0
Sample D Male 36.2
Ventral hippocampus
nTPM: 48.1
Samples: 4

Max nTPM: 60.2
Min nTPM: 34.2
Sample A Female 45.0
Sample B Female 34.2
Sample C Male 60.2
Sample D Male 53.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 148.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 137.5
Samples: 4

Max nTPM: 148.8
Min nTPM: 115.3
Sample A Male 115.3
Sample B Male 139.2
Sample C Female 148.8
Sample D Female 146.6
Hippocampal formation
nTPM: 148.6
Samples: 4

Max nTPM: 169.9
Min nTPM: 133.5
Sample A Male 169.9
Sample B Male 133.5
Sample C Female 144.2
Sample D Female 146.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.8
68667823 Antisense, RP_050201_02_H07, Mouse strain C57BL/6J (56 days, male) 21.8

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The Human Protein Atlas

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