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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:57.8 nTPM
HPA:57.8 nTPM
GTEx:56.2 nTPM
FANTOM5:177.4 Scaled Tags Per Million
Pig:113.7 nTPM
Mouse:192.4 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075014
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.8
Sample id Sample description nTPM
Hippocampus
nTPM: 49.0
1898 Male, age 80, left hemisphere 64.6
1855 Male, age 76, left hemisphere 52.7
2621 Female, age 67, right hemisphere 51.5
2148 Female, age 91, left hemisphere 44.8
2529 Female, age 94, left hemisphere 41.0
1911 Female, age 85, right hemisphere 39.1
Dentate gyrus
nTPM: 52.0
2010 Male, age 76, both hemispheres 65.0
1927 Female, age 91, both hemispheres 58.6
2530 Female, age 94, left hemisphere 55.6
2528 Male, age 74, both hemispheres 47.2
2246 Female, age 85, both hemispheres 44.7
2531 Female, age 67, both hemispheres 40.8
Entorhinal gyrus
nTPM: 46.2
2764 Male, age 80, right hemisphere 53.3
1787 Male, age 76, left hemisphere 47.7
2613 Female, age 94, left hemisphere 47.7
1938 Female, age 85, left hemisphere 46.8
2117 Female, age 91, right hemisphere 43.0
2686 Male, age 75, right hemisphere 38.4
Hippocampus, CA1
nTPM: 57.8
2749 Male, age 80, left hemisphere 89.6
1873 Female, age 85, both hemispheres 57.8
2045 Male, age 76, both hemispheres 53.6
2527 Male, age 74, both hemispheres 47.2
2082 Female, age 91, right hemisphere 40.8
Hippocampus, CA2
nTPM: 52.9
1963 Male, age 80, left hemisphere 78.6
1892 Male, age 76, both hemispheres 65.0
2249 Male, age 74, both hemispheres 48.8
2437 Female, age 94, left hemisphere 43.2
2113 Female, age 91, right hemisphere 41.6
1940 Female, age 85, left hemisphere 40.4
Hippocampus, CA3
nTPM: 50.4
2137 Male, age 80, left hemisphere 65.0
1867 Male, age 76, both hemispheres 54.2
2436 Male, age 74, both hemispheres 50.5
2620 Female, age 94, left hemisphere 50.1
1891 Female, age 85, both hemispheres 41.5
2861 Female, age 67, both hemispheres 41.3
Parahippocampal cortex
nTPM: 46.9
1850 Male, age 80, both hemispheres 56.4
2018 Male, age 76, both hemispheres 49.4
1933 Female, age 85, both hemispheres 49.3
2245 Female, age 91, both hemispheres 48.8
1990 Female, age 91, right hemisphere 47.9
2250 Female, age 67, right hemisphere 47.9
2532 Female, age 72, left hemisphere 47.2
2693 Female, age 94, both hemispheres 46.9
2692 Male, age 74, both hemispheres 39.7
2622 Female, age 67, right hemisphere 35.6
Perirhinal gyrus
nTPM: 56.2
1847 Female, age 91, left hemisphere 60.7
1794 Male, age 80, right hemisphere 60.3
2521 Female, age 94, right hemisphere 56.5
1841 Female, age 85, right hemisphere 53.2
2848 Male, age 76, right hemisphere 50.2
Subiculum
nTPM: 43.3
1977 Female, age 85, both hemispheres 49.0
1901 Male, age 80, both hemispheres 47.5
2042 Male, age 76, both hemispheres 42.8
2619 Male, age 74, both hemispheres 41.1
2729 Female, age 91, right hemisphere 40.6
2438 Female, age 94, left hemisphere 38.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.2
Samples: 197

Max nTPM: 110.2
Min nTPM: 32.0
Std nTPM: 16.1
Median nTPM: 51.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 110.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 100.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 99.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 97.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 96.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 95.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 92.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 91.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 90.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 86.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 86.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 177.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 177.4
FF:10169-103B7 60 years, female 268.9
FF:10153-102I9 76 years, female 86.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 108.5
Samples: 4

Max nTPM: 134.8
Min nTPM: 81.5
Sample A Female 134.8
Sample B Female 101.1
Sample C Male 116.7
Sample D Male 81.5
Entorhinal cortex
nTPM: 113.7
Samples: 4

Max nTPM: 131.4
Min nTPM: 96.7
Sample A Female 114.1
Sample B Female 131.4
Sample C Male 112.4
Sample D Male 96.7
Subiculum
nTPM: 102.0
Samples: 4

Max nTPM: 135.1
Min nTPM: 85.7
Sample A Female 135.1
Sample B Female 94.6
Sample C Male 92.6
Sample D Male 85.7
Ventral hippocampus
nTPM: 100.9
Samples: 4

Max nTPM: 118.7
Min nTPM: 82.7
Sample A Female 116.8
Sample B Female 82.7
Sample C Male 118.7
Sample D Male 85.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 192.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 192.4
Samples: 4

Max nTPM: 218.3
Min nTPM: 179.2
Sample A Male 179.2
Sample B Male 185.1
Sample C Female 186.9
Sample D Female 218.3
Hippocampal formation
nTPM: 149.3
Samples: 4

Max nTPM: 177.5
Min nTPM: 137.0
Sample A Male 177.5
Sample B Male 137.4
Sample C Female 137.0
Sample D Female 145.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
69028402 Antisense, RP_050316_01_C04, Mouse strain C57BL/6J (56 days, male) 6.6

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