ABOUTMENU
HELP
NEWS
MARK1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:7.4 nTPM
HPA:7.4 nTPM
GTEx:6.3 nTPM
FANTOM5:46.4 Scaled Tags Per Million
Pig:33.6 nTPM
Mouse:35.7 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007421Antibody HPA008061
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.4
Sample id Sample description nTPM
Hippocampus
nTPM: 5.7
1898 Male, age 80, left hemisphere 7.7
1855 Male, age 76, left hemisphere 6.0
2621 Female, age 67, right hemisphere 6.0
2148 Female, age 91, left hemisphere 5.2
2529 Female, age 94, left hemisphere 4.9
1911 Female, age 85, right hemisphere 4.5
Dentate gyrus
nTPM: 5.4
1927 Female, age 91, both hemispheres 6.3
2010 Male, age 76, both hemispheres 5.6
2531 Female, age 67, both hemispheres 5.3
2246 Female, age 85, both hemispheres 5.2
2528 Male, age 74, both hemispheres 5.1
2530 Female, age 94, left hemisphere 4.9
Entorhinal gyrus
nTPM: 5.9
2613 Female, age 94, left hemisphere 6.6
1938 Female, age 85, left hemisphere 6.5
2764 Male, age 80, right hemisphere 6.2
1787 Male, age 76, left hemisphere 5.9
2686 Male, age 75, right hemisphere 5.4
2117 Female, age 91, right hemisphere 4.7
Hippocampus, CA1
nTPM: 5.7
2749 Male, age 80, left hemisphere 8.1
1873 Female, age 85, both hemispheres 6.0
2527 Male, age 74, both hemispheres 5.2
2045 Male, age 76, both hemispheres 5.1
2082 Female, age 91, right hemisphere 4.2
Hippocampus, CA2
nTPM: 5.8
1892 Male, age 76, both hemispheres 7.7
1963 Male, age 80, left hemisphere 6.6
2249 Male, age 74, both hemispheres 5.6
1940 Female, age 85, left hemisphere 5.0
2437 Female, age 94, left hemisphere 5.0
2113 Female, age 91, right hemisphere 4.6
Hippocampus, CA3
nTPM: 5.5
1867 Male, age 76, both hemispheres 6.8
2436 Male, age 74, both hemispheres 6.3
2137 Male, age 80, left hemisphere 5.4
2620 Female, age 94, left hemisphere 5.1
1891 Female, age 85, both hemispheres 4.9
2861 Female, age 67, both hemispheres 4.9
Parahippocampal cortex
nTPM: 6.2
1850 Male, age 80, both hemispheres 8.0
1990 Female, age 91, right hemisphere 6.7
2532 Female, age 72, left hemisphere 6.6
1933 Female, age 85, both hemispheres 6.5
2693 Female, age 94, both hemispheres 6.5
2245 Female, age 91, both hemispheres 5.8
2622 Female, age 67, right hemisphere 5.7
2250 Female, age 67, right hemisphere 5.5
2692 Male, age 74, both hemispheres 5.4
2018 Male, age 76, both hemispheres 4.8
Perirhinal gyrus
nTPM: 7.4
1847 Female, age 91, left hemisphere 8.7
1794 Male, age 80, right hemisphere 7.7
1841 Female, age 85, right hemisphere 7.3
2521 Female, age 94, right hemisphere 6.6
2848 Male, age 76, right hemisphere 6.5
Subiculum
nTPM: 5.2
1901 Male, age 80, both hemispheres 6.0
1977 Female, age 85, both hemispheres 6.0
2619 Male, age 74, both hemispheres 5.4
2438 Female, age 94, left hemisphere 4.9
2729 Female, age 91, right hemisphere 4.7
2042 Male, age 76, both hemispheres 4.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.3
Samples: 197

Max nTPM: 13.3
Min nTPM: 2.0
Std nTPM: 2.3
Median nTPM: 5.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 12.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 12.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 11.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 11.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 11.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 11.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 11.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 10.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 10.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.4
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 36.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 21.8
Min nTPM: 16.5
Sample A Female 19.0
Sample B Female 17.3
Sample C Male 21.8
Sample D Male 16.5
Entorhinal cortex
nTPM: 33.6
Samples: 4

Max nTPM: 36.6
Min nTPM: 32.0
Sample A Female 32.3
Sample B Female 33.6
Sample C Male 36.6
Sample D Male 32.0
Subiculum
nTPM: 25.2
Samples: 4

Max nTPM: 30.1
Min nTPM: 22.5
Sample A Female 30.1
Sample B Female 22.7
Sample C Male 22.5
Sample D Male 25.5
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.9
Sample A Female 14.9
Sample B Female 16.1
Sample C Male 21.0
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 40.1
Min nTPM: 30.8
Sample A Male 35.7
Sample B Male 40.1
Sample C Female 30.8
Sample D Female 36.1
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 26.0
Min nTPM: 22.6
Sample A Male 25.3
Sample B Male 26.0
Sample C Female 22.6
Sample D Female 22.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
71789795 Antisense, RP_050921_03_F05, Mouse strain C57BL/6J (56 days, male) 0.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.