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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:22.8 nTPM
HPA:22.8 nTPM
GTEx:18.6 nTPM
FANTOM5:42.3 Scaled Tags Per Million
Pig:183.9 nTPM
Mouse:91.1 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026441Antibody CAB013090
Glial cells LowNot detected
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
2621 Female, age 67, right hemisphere 27.3
2529 Female, age 94, left hemisphere 23.2
1898 Male, age 80, left hemisphere 16.0
2148 Female, age 91, left hemisphere 15.4
1911 Female, age 85, right hemisphere 10.9
1855 Male, age 76, left hemisphere 1.0
Dentate gyrus
nTPM: 13.3
2530 Female, age 94, left hemisphere 35.8
1927 Female, age 91, both hemispheres 20.0
2531 Female, age 67, both hemispheres 17.2
2246 Female, age 85, both hemispheres 6.0
2010 Male, age 76, both hemispheres 0.8
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 9.1
1938 Female, age 85, left hemisphere 16.2
2686 Male, age 75, right hemisphere 14.5
2764 Male, age 80, right hemisphere 12.0
1787 Male, age 76, left hemisphere 7.7
2613 Female, age 94, left hemisphere 4.5
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 9.9
1873 Female, age 85, both hemispheres 17.4
2749 Male, age 80, left hemisphere 14.9
2045 Male, age 76, both hemispheres 9.5
2527 Male, age 74, both hemispheres 7.9
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 13.1
1963 Male, age 80, left hemisphere 28.0
2437 Female, age 94, left hemisphere 20.0
1892 Male, age 76, both hemispheres 18.5
1940 Female, age 85, left hemisphere 6.5
2113 Female, age 91, right hemisphere 5.7
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 14.5
2137 Male, age 80, left hemisphere 33.6
2861 Female, age 67, both hemispheres 23.2
1891 Female, age 85, both hemispheres 15.4
1867 Male, age 76, both hemispheres 14.8
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
Parahippocampal cortex
nTPM: 14.7
1850 Male, age 80, both hemispheres 32.2
2532 Female, age 72, left hemisphere 28.4
2245 Female, age 91, both hemispheres 23.1
2250 Female, age 67, right hemisphere 15.9
1933 Female, age 85, both hemispheres 12.9
2018 Male, age 76, both hemispheres 12.4
2693 Female, age 94, both hemispheres 11.4
2622 Female, age 67, right hemisphere 5.6
1990 Female, age 91, right hemisphere 5.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 22.8
1841 Female, age 85, right hemisphere 37.4
1794 Male, age 80, right hemisphere 25.5
2848 Male, age 76, right hemisphere 22.5
1847 Female, age 91, left hemisphere 16.3
2521 Female, age 94, right hemisphere 12.4
Subiculum
nTPM: 9.9
2438 Female, age 94, left hemisphere 29.8
1901 Male, age 80, both hemispheres 17.0
1977 Female, age 85, both hemispheres 12.8
2042 Male, age 76, both hemispheres 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.6
Samples: 197

Max nTPM: 39.7
Min nTPM: 7.2
Std nTPM: 5.3
Median nTPM: 17.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 39.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 36.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 32.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 32.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 31.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 31.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 30.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 30.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 30.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 29.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.3
FF:10153-102I9 76 years, female 50.1
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 183.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 175.5
Samples: 4

Max nTPM: 210.8
Min nTPM: 128.4
Sample A Female 193.8
Sample B Female 169.1
Sample C Male 210.8
Sample D Male 128.4
Entorhinal cortex
nTPM: 183.9
Samples: 4

Max nTPM: 202.6
Min nTPM: 166.8
Sample A Female 166.8
Sample B Female 202.6
Sample C Male 196.7
Sample D Male 169.5
Subiculum
nTPM: 147.6
Samples: 4

Max nTPM: 209.3
Min nTPM: 119.3
Sample A Female 209.3
Sample B Female 138.1
Sample C Male 123.8
Sample D Male 119.3
Ventral hippocampus
nTPM: 143.0
Samples: 4

Max nTPM: 201.8
Min nTPM: 115.6
Sample A Female 115.6
Sample B Female 126.5
Sample C Male 128.0
Sample D Male 201.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.1
Samples: 4

Max nTPM: 92.4
Min nTPM: 76.1
Sample A Male 77.7
Sample B Male 76.1
Sample C Female 78.2
Sample D Female 92.4
Hippocampal formation
nTPM: 91.1
Samples: 4

Max nTPM: 98.3
Min nTPM: 76.8
Sample A Male 91.2
Sample B Male 98.1
Sample C Female 98.3
Sample D Female 76.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
77465022 Antisense, RP_070129_02_G12, Mouse strain C57BL/6J (56 days, male) 12.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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