ABOUTMENU
HELP
NEWS
CDK18
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:148.1 nTPM
HPA:148.1 nTPM
GTEx:132.0 nTPM
FANTOM5:285.6 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:28.2 nTPM
Allen mouse:1.5 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 148.1
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 105.3
1830 Male, age 51, unknown 126.9
1870 Female, age 42, unknown 125.4
2019 Male, age 18, unknown 123.0
2411 Female, age 72, unknown 118.5
1833 Male, age 53, unknown 115.5
2586 Male, age 75, left hemisphere 110.0
2828 Female, age 72, unknown 96.7
2666 Male, age 74, left hemisphere 91.8
1827 Male, age 72, unknown 73.7
2219 Male, age 76, both hemispheres 71.5
Dorsal raphe nucleus
nTPM: 89.0
2750 Male, age 76, both hemispheres 146.2
1828 Male, age 53, unknown 83.8
2047 Male, age 72, unknown 80.6
2016 Female, age 72, unknown 75.5
2298 Female, age 72, unknown 59.0
Inferior colliculus
nTPM: 75.8
1890 Male, age 53, unknown 86.5
1848 Female, age 42, unknown 80.1
2849 Male, age 72, unknown 71.1
2097 Female, age 72, unknown 65.5
Median raphe nucleus
nTPM: 100.5
2220 Male, age 76, midline 100.5
Pedunculopontine tegmental nucleus
nTPM: 93.0
2334 Male, age 80, both hemispheres 100.5
2338 Male, age 61, both hemispheres 100.4
1921 Female, age 85, both hemispheres 78.2
Periaquaductal grey, anterior
nTPM: 60.0
1947 Male, age 18, unknown 61.2
2502 Female, age 75, unknown 59.8
1795 Male, age 51, unknown 58.8
Periaquaductal grey, dorsal
nTPM: 56.2
2464 Female, age 72, unknown 71.1
1831 Male, age 72, unknown 64.4
2850 Male, age 76, both hemispheres 44.6
1840 Male, age 53, unknown 44.5
Periaquaductal grey, lateral
nTPM: 60.2
2272 Male, age 74, both hemispheres 72.2
2053 Male, age 18, unknown 65.0
2140 Male, age 76, both hemispheres 43.4
Pretectal area
nTPM: 67.6
2407 Male, age 75, both hemispheres 90.1
1815 Male, age 53, unknown 79.8
2316 Male, age 76, right hemisphere 79.0
2007 Male, age 72, unknown 75.7
1817 Female, age 42, unknown 73.1
2825 Male, age 18, unknown 72.2
2273 Male, age 74, both hemispheres 62.0
2224 Female, age 72, unknown 55.6
1944 Female, age 72, unknown 53.5
2667 Female, age 75, unknown 51.4
1816 Male, age 51, unknown 50.7
Red nucleus
nTPM: 148.1
1865 Male, age 51, unknown 166.9
2823 Male, age 76, right hemisphere 162.9
1821 Female, age 72, unknown 157.8
2227 Male, age 72, unknown 157.2
2769 Male, age 72, unknown 157.2
1904 Male, age 53, unknown 153.0
2584 Male, age 75, left hemisphere 150.0
2588 Male, age 74, left hemisphere 142.7
2785 Male, age 18, unknown 139.7
1954 Female, age 42, unknown 131.6
2725 Female, age 75, unknown 129.1
2503 Female, age 72, unknown 128.8
Substantia nigra
nTPM: 84.4
2583 Male, age 75, right hemisphere 115.6
2590 Female, age 75, unknown 106.6
1889 Female, age 72, unknown 89.5
1851 Male, age 51, unknown 87.6
1941 Male, age 53, unknown 86.1
2409 Female, age 72, unknown 83.0
2699 Male, age 18, unknown 76.4
1916 Female, age 42, unknown 69.5
2665 Male, age 74, both hemispheres 67.1
2241 Male, age 72, unknown 62.7
Superior colliculus
nTPM: 82.6
1913 Female, age 42, unknown 106.0
1995 Male, age 72, unknown 99.6
2587 Male, age 74, left hemisphere 96.5
2668 Female, age 75, unknown 95.3
1839 Male, age 51, unknown 86.9
1895 Male, age 76, right hemisphere 86.5
1796 Male, age 53, unknown 71.9
2664 Male, age 75, both hemispheres 65.5
2261 Male, age 18, unknown 59.4
2087 Female, age 72, unknown 58.2
Ventral tegmental area
nTPM: 104.2
2223 Female, age 72, unknown 178.7
2410 Female, age 72, unknown 109.4
2218 Male, age 76, both hemispheres 90.7
1942 Male, age 51, unknown 89.5
2021 Male, age 53, unknown 83.8
1915 Female, age 42, unknown 73.3

MIDBRAIN - GTEx RNA-seqi
Average nTPM 132.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 132.0
Samples: 139

Max nTPM: 684.0
Min nTPM: 29.6
Std nTPM: 83.7
Median nTPM: 118.0
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 684.0
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 539.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 312.9
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 311.3
GTEX-NPJ7-0011-R2a-SM-2I3GF 60-69 years, female 291.4
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 275.9
GTEX-Q2AG-0011-R2A-SM-2HMIT 40-49 years, female 265.8
GTEX-1I1CD-0011-R2a-SM-CM2T3 60-69 years, female 264.0
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 253.5
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 252.5
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 247.2
Show allShow less

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 285.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 285.6
FF:10158-103A5 76 years, female 285.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 27.2
Pig sample Sample description nTPM
Midbrain
nTPM: 27.2
Samples: 4

Max nTPM: 52.9
Min nTPM: 12.7
Sample A Female 52.9
Sample B Female 20.3
Sample C Male 12.7
Sample D Male 22.8
Periaqueductal gray
nTPM: 15.1
Samples: 3

Max nTPM: 16.6
Min nTPM: 14.0
Sample B Female 16.6
Sample C Male 14.0
Sample D Male 14.8
Substantia nigra
nTPM: 25.4
Samples: 4

Max nTPM: 31.1
Min nTPM: 16.5
Sample A Female 25.3
Sample B Female 16.5
Sample C Male 31.1
Sample D Male 28.7
Superior colliculi
nTPM: 17.9
Samples: 4

Max nTPM: 24.7
Min nTPM: 10.6
Sample A Female 21.6
Sample B Female 10.6
Sample C Male 14.7
Sample D Male 24.7

MIDBRAIN - Mouse RNA-seqi
Average nTPM 28.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 28.3
Samples: 4

Max nTPM: 29.5
Min nTPM: 26.9
Sample A Male 29.3
Sample B Male 26.9
Sample C Female 29.5
Sample D Female 27.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.5
69782879 Antisense, RP_050505_03_H11, Mouse strain C57BL/6J (56 days, male) 1.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.