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PRDX6
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:184.1 nTPM
HPA:184.1 nTPM
GTEx:103.9 nTPM
FANTOM5:325.6 Scaled Tags Per Million
Pig:46.8 nTPM
Mouse:94.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006983Antibody CAB008663
Glial cells MediumHigh
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 184.1
Sample id Sample description nTPM
Hippocampus
nTPM: 184.1
2148 Female, age 91, left hemisphere 198.1
1898 Male, age 80, left hemisphere 190.0
1911 Female, age 85, right hemisphere 189.8
1855 Male, age 76, left hemisphere 187.0
2529 Female, age 94, left hemisphere 172.8
2621 Female, age 67, right hemisphere 166.8
Dentate gyrus
nTPM: 174.3
2528 Male, age 74, both hemispheres 203.7
2246 Female, age 85, both hemispheres 178.7
2010 Male, age 76, both hemispheres 173.0
1927 Female, age 91, both hemispheres 172.6
2530 Female, age 94, left hemisphere 160.4
2531 Female, age 67, both hemispheres 157.2
Entorhinal gyrus
nTPM: 164.7
2117 Female, age 91, right hemisphere 195.0
1938 Female, age 85, left hemisphere 165.9
1787 Male, age 76, left hemisphere 162.5
2764 Male, age 80, right hemisphere 157.6
2686 Male, age 75, right hemisphere 155.7
2613 Female, age 94, left hemisphere 151.3
Hippocampus, CA1
nTPM: 177.6
1873 Female, age 85, both hemispheres 193.2
2527 Male, age 74, both hemispheres 188.9
2045 Male, age 76, both hemispheres 171.8
2082 Female, age 91, right hemisphere 171.1
2749 Male, age 80, left hemisphere 162.8
Hippocampus, CA2
nTPM: 171.4
2249 Male, age 74, both hemispheres 188.9
2113 Female, age 91, right hemisphere 181.5
1940 Female, age 85, left hemisphere 168.7
1963 Male, age 80, left hemisphere 167.7
2437 Female, age 94, left hemisphere 161.3
1892 Male, age 76, both hemispheres 160.6
Hippocampus, CA3
nTPM: 172.2
1891 Female, age 85, both hemispheres 184.8
2620 Female, age 94, left hemisphere 176.1
2436 Male, age 74, both hemispheres 174.1
1867 Male, age 76, both hemispheres 167.2
2137 Male, age 80, left hemisphere 166.0
2861 Female, age 67, both hemispheres 164.8
Parahippocampal cortex
nTPM: 164.8
2692 Male, age 74, both hemispheres 179.2
1990 Female, age 91, right hemisphere 169.0
2018 Male, age 76, both hemispheres 167.7
1850 Male, age 80, both hemispheres 165.6
1933 Female, age 85, both hemispheres 163.6
2245 Female, age 91, both hemispheres 163.5
2622 Female, age 67, right hemisphere 163.4
2250 Female, age 67, right hemisphere 161.4
2693 Female, age 94, both hemispheres 158.4
2532 Female, age 72, left hemisphere 156.1
Perirhinal gyrus
nTPM: 161.1
1794 Male, age 80, right hemisphere 166.1
1847 Female, age 91, left hemisphere 164.2
1841 Female, age 85, right hemisphere 163.0
2521 Female, age 94, right hemisphere 157.2
2848 Male, age 76, right hemisphere 154.9
Subiculum
nTPM: 178.7
2729 Female, age 91, right hemisphere 213.7
2619 Male, age 74, both hemispheres 190.0
2042 Male, age 76, both hemispheres 173.7
1901 Male, age 80, both hemispheres 169.4
2438 Female, age 94, left hemisphere 165.4
1977 Female, age 85, both hemispheres 160.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 103.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 103.9
Samples: 197

Max nTPM: 260.9
Min nTPM: 40.3
Std nTPM: 34.2
Median nTPM: 98.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 260.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 244.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 207.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 182.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 175.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 170.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 170.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 169.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 169.1
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 168.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 168.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 325.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 325.6
FF:10153-102I9 76 years, female 333.2
FF:10169-103B7 60 years, female 318.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.8
Samples: 4

Max nTPM: 62.9
Min nTPM: 32.3
Sample A Female 62.9
Sample B Female 41.7
Sample C Male 50.2
Sample D Male 32.3
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 41.1
Min nTPM: 29.4
Sample A Female 37.1
Sample B Female 41.1
Sample C Male 29.8
Sample D Male 29.4
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 43.3
Min nTPM: 29.4
Sample A Female 38.5
Sample B Female 32.7
Sample C Male 29.4
Sample D Male 43.3
Ventral hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 47.0
Min nTPM: 28.7
Sample A Female 44.7
Sample B Female 28.7
Sample C Male 42.8
Sample D Male 47.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.6
Samples: 4

Max nTPM: 103.1
Min nTPM: 76.8
Sample A Male 90.2
Sample B Male 76.8
Sample C Female 103.1
Sample D Female 84.1
Hippocampal formation
nTPM: 94.7
Samples: 4

Max nTPM: 109.3
Min nTPM: 79.6
Sample A Male 106.0
Sample B Male 83.7
Sample C Female 79.6
Sample D Female 109.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
686199 Antisense, RP_040916_01_A07, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

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