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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:86.3 nTPM
HPA:86.3 nTPM
GTEx:77.5 nTPM
FANTOM5:27.6 Scaled Tags Per Million
Pig:77.7 nTPM
Mouse:92.5 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013386
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 86.3
Sample id Sample description nTPM
Hippocampus
nTPM: 83.2
2529 Female, age 94, left hemisphere 88.5
1898 Male, age 80, left hemisphere 87.2
1911 Female, age 85, right hemisphere 81.9
2148 Female, age 91, left hemisphere 81.7
1855 Male, age 76, left hemisphere 80.5
2621 Female, age 67, right hemisphere 79.3
Dentate gyrus
nTPM: 82.7
2010 Male, age 76, both hemispheres 89.3
2528 Male, age 74, both hemispheres 88.7
2530 Female, age 94, left hemisphere 88.3
2246 Female, age 85, both hemispheres 80.1
1927 Female, age 91, both hemispheres 76.8
2531 Female, age 67, both hemispheres 73.1
Entorhinal gyrus
nTPM: 78.8
2117 Female, age 91, right hemisphere 86.8
1938 Female, age 85, left hemisphere 82.2
1787 Male, age 76, left hemisphere 82.1
2764 Male, age 80, right hemisphere 76.7
2686 Male, age 75, right hemisphere 72.8
2613 Female, age 94, left hemisphere 72.2
Hippocampus, CA1
nTPM: 82.9
2527 Male, age 74, both hemispheres 87.3
1873 Female, age 85, both hemispheres 86.5
2045 Male, age 76, both hemispheres 81.4
2082 Female, age 91, right hemisphere 80.1
2749 Male, age 80, left hemisphere 79.0
Hippocampus, CA2
nTPM: 84.0
2249 Male, age 74, both hemispheres 98.1
1892 Male, age 76, both hemispheres 85.7
1963 Male, age 80, left hemisphere 83.5
2113 Female, age 91, right hemisphere 79.7
2437 Female, age 94, left hemisphere 79.4
1940 Female, age 85, left hemisphere 77.8
Hippocampus, CA3
nTPM: 80.0
1891 Female, age 85, both hemispheres 86.4
1867 Male, age 76, both hemispheres 85.3
2436 Male, age 74, both hemispheres 84.2
2620 Female, age 94, left hemisphere 76.7
2137 Male, age 80, left hemisphere 76.3
2861 Female, age 67, both hemispheres 71.1
Parahippocampal cortex
nTPM: 81.3
2018 Male, age 76, both hemispheres 86.0
1850 Male, age 80, both hemispheres 84.7
2250 Female, age 67, right hemisphere 84.4
1933 Female, age 85, both hemispheres 82.6
2245 Female, age 91, both hemispheres 81.6
2692 Male, age 74, both hemispheres 81.2
2532 Female, age 72, left hemisphere 80.7
1990 Female, age 91, right hemisphere 80.1
2693 Female, age 94, both hemispheres 77.7
2622 Female, age 67, right hemisphere 74.0
Perirhinal gyrus
nTPM: 82.2
1841 Female, age 85, right hemisphere 85.1
1847 Female, age 91, left hemisphere 83.8
1794 Male, age 80, right hemisphere 82.7
2521 Female, age 94, right hemisphere 82.3
2848 Male, age 76, right hemisphere 76.9
Subiculum
nTPM: 86.3
2438 Female, age 94, left hemisphere 92.9
2042 Male, age 76, both hemispheres 87.1
2619 Male, age 74, both hemispheres 85.9
2729 Female, age 91, right hemisphere 84.8
1901 Male, age 80, both hemispheres 84.6
1977 Female, age 85, both hemispheres 82.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.5
Samples: 197

Max nTPM: 118.0
Min nTPM: 42.7
Std nTPM: 14.1
Median nTPM: 78.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 118.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 116.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 115.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 113.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 105.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 104.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 104.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 101.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 100.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 100.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 99.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.6
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 19.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.8
Samples: 4

Max nTPM: 98.9
Min nTPM: 54.5
Sample A Female 98.9
Sample B Female 73.3
Sample C Male 84.3
Sample D Male 54.5
Entorhinal cortex
nTPM: 68.5
Samples: 4

Max nTPM: 84.3
Min nTPM: 56.3
Sample A Female 64.1
Sample B Female 84.3
Sample C Male 69.3
Sample D Male 56.3
Subiculum
nTPM: 71.5
Samples: 4

Max nTPM: 91.4
Min nTPM: 62.1
Sample A Female 91.4
Sample B Female 65.1
Sample C Male 62.1
Sample D Male 67.3
Ventral hippocampus
nTPM: 73.3
Samples: 4

Max nTPM: 81.4
Min nTPM: 64.4
Sample A Female 81.4
Sample B Female 64.4
Sample C Male 78.7
Sample D Male 68.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.0
Samples: 4

Max nTPM: 95.4
Min nTPM: 80.0
Sample A Male 80.0
Sample B Male 85.9
Sample C Female 95.4
Sample D Female 90.8
Hippocampal formation
nTPM: 92.5
Samples: 4

Max nTPM: 97.4
Min nTPM: 86.0
Sample A Male 97.4
Sample B Male 86.0
Sample C Female 93.3
Sample D Female 93.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
68667312 Antisense, RP_050201_02_A06, Mouse strain C57BL/6J (56 days, male) 3.3

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