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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		165.679
RNA expressioni
Consensus:10.4 nTPM
HPA:10.4 nTPM
GTEx:14.1 nTPM
FANTOM5:51.5 Scaled Tags Per Million
Pig:41.8 nTPM
Mouse:51.3 nTPM
Allen mouse:16.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA069945
Amygdala mean intensity 165.679
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 165.679
Basal medial amygdaloid nucleus 56.437
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 91.073
Cortical amygdala 115.071
Central amygdala 57.197
Medial amygdaloid nucleus 35.928

AMYGDALA - HPA Brain RNA-seq
Max nTPM 10.4
Sample id Sample description nTPM
Amygdala
nTPM: 2.1
1987 Female, age 91, left hemisphere 10.7
2514 Male, age 75, right hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 3.6
2243 Female, age 91, right hemisphere 12.9
2110 Male, age 80, left hemisphere 9.2
1955 Male, age 76, both hemispheres 0.0
2609 Male, age 75, right hemisphere 0.0
2685 Female, age 94, left hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 3.1
2239 Male, age 80, left hemisphere 10.5
2701 Female, age 91, right hemisphere 5.2
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 8.6
2829 Male, age 80, left hemisphere 21.1
2429 Female, age 94, left hemisphere 11.5
2242 Female, age 91, right hemisphere 10.1
2535 Female, age 67, right hemisphere 8.7
2240 Male, age 76, both hemispheres 0.0
2428 Male, age 75, right hemisphere 0.0
Lateral amygdala
nTPM: 1.2
2255 Female, age 91, right hemisphere 7.2
1883 Male, age 76, both hemispheres 0.0
2256 Male, age 80, left hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
2534 Female, age 94, left hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 10.4
1974 Female, age 91, both hemispheres 18.4
2486 Female, age 94, both hemispheres 12.7
2201 Male, age 74, unknown 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 14.1
Samples: 152

Max nTPM: 64.8
Min nTPM: 0.3
Std nTPM: 11.3
Median nTPM: 11.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 64.8
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 48.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 46.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 45.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 42.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 41.1
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 40.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 37.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 36.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 35.0
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 32.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 51.5
FF:10151-102I7 76 years, female 51.5

AMYGDALA - Pig RNA-seqi
Average nTPM 41.8
Pig sample Sample description nTPM
Amygdala
nTPM: 41.8
Samples: 4

Max nTPM: 55.3
Min nTPM: 27.3
Sample A Female 55.3
Sample B Female 27.3
Sample C Male 45.7
Sample D Male 39.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 51.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 51.4
Samples: 4

Max nTPM: 53.2
Min nTPM: 49.1
Sample A Male 53.2
Sample B Male 49.1
Sample C Female 50.1
Sample D Female 53.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 16.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 16.3
284 Antisense, RP_Baylor_253893, Mouse strain C57BL/6J (56 days, male) 18.1
79913447 Antisense, RP_071204_04_G08, Mouse strain C57BL/6J (56 days, male) 14.5
79591675 Antisense, RP_071204_04_G08, Mouse strain C57BL/6J (56 days, male) 13.6
283 Antisense, RP_Baylor_253893, Mouse strain C57BL/6J (56 days, male) 13.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.