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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:158.5 nTPM
HPA:158.5 nTPM
GTEx:131.3 nTPM
FANTOM5:86.5 Scaled Tags Per Million
Pig:55.0 nTPM
Mouse:133.8 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005695Antibody CAB022068Antibody CAB035999
Glial cells Not detectedNot detectedMedium
Neuronal cells MediumNot detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 158.5
Sample id Sample description nTPM
Hippocampus
nTPM: 148.4
1898 Male, age 80, left hemisphere 154.9
2621 Female, age 67, right hemisphere 153.3
2148 Female, age 91, left hemisphere 151.9
2529 Female, age 94, left hemisphere 146.4
1911 Female, age 85, right hemisphere 143.5
1855 Male, age 76, left hemisphere 140.1
Dentate gyrus
nTPM: 144.4
1927 Female, age 91, both hemispheres 159.1
2530 Female, age 94, left hemisphere 151.8
2531 Female, age 67, both hemispheres 145.6
2528 Male, age 74, both hemispheres 142.4
2246 Female, age 85, both hemispheres 134.7
2010 Male, age 76, both hemispheres 133.1
Entorhinal gyrus
nTPM: 158.5
2613 Female, age 94, left hemisphere 171.9
2686 Male, age 75, right hemisphere 170.2
2764 Male, age 80, right hemisphere 163.6
1938 Female, age 85, left hemisphere 159.6
1787 Male, age 76, left hemisphere 148.7
2117 Female, age 91, right hemisphere 136.8
Hippocampus, CA1
nTPM: 145.9
2749 Male, age 80, left hemisphere 167.8
1873 Female, age 85, both hemispheres 148.5
2082 Female, age 91, right hemisphere 142.3
2527 Male, age 74, both hemispheres 139.6
2045 Male, age 76, both hemispheres 131.1
Hippocampus, CA2
nTPM: 146.1
1963 Male, age 80, left hemisphere 159.4
2437 Female, age 94, left hemisphere 152.6
1892 Male, age 76, both hemispheres 144.3
2113 Female, age 91, right hemisphere 143.8
1940 Female, age 85, left hemisphere 140.7
2249 Male, age 74, both hemispheres 136.1
Hippocampus, CA3
nTPM: 152.3
2861 Female, age 67, both hemispheres 170.1
2620 Female, age 94, left hemisphere 165.0
2137 Male, age 80, left hemisphere 162.3
2436 Male, age 74, both hemispheres 141.9
1891 Female, age 85, both hemispheres 138.9
1867 Male, age 76, both hemispheres 135.4
Parahippocampal cortex
nTPM: 151.5
2622 Female, age 67, right hemisphere 167.0
1850 Male, age 80, both hemispheres 160.8
2693 Female, age 94, both hemispheres 157.1
2692 Male, age 74, both hemispheres 155.7
1933 Female, age 85, both hemispheres 154.1
2532 Female, age 72, left hemisphere 148.4
1990 Female, age 91, right hemisphere 146.2
2245 Female, age 91, both hemispheres 145.0
2250 Female, age 67, right hemisphere 141.3
2018 Male, age 76, both hemispheres 139.0
Perirhinal gyrus
nTPM: 157.0
1847 Female, age 91, left hemisphere 170.2
1794 Male, age 80, right hemisphere 164.0
1841 Female, age 85, right hemisphere 158.9
2848 Male, age 76, right hemisphere 151.5
2521 Female, age 94, right hemisphere 140.3
Subiculum
nTPM: 141.5
1901 Male, age 80, both hemispheres 147.8
2619 Male, age 74, both hemispheres 147.7
1977 Female, age 85, both hemispheres 144.5
2729 Female, age 91, right hemisphere 140.1
2042 Male, age 76, both hemispheres 134.9
2438 Female, age 94, left hemisphere 134.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 131.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 131.3
Samples: 197

Max nTPM: 289.5
Min nTPM: 44.7
Std nTPM: 39.6
Median nTPM: 129.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 289.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 267.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 252.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 208.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 206.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 204.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 201.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 201.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 200.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 197.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 196.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.5
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 69.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.1
Samples: 4

Max nTPM: 58.3
Min nTPM: 35.5
Sample A Female 58.3
Sample B Female 47.0
Sample C Male 43.6
Sample D Male 35.5
Entorhinal cortex
nTPM: 55.0
Samples: 4

Max nTPM: 61.3
Min nTPM: 45.7
Sample A Female 54.8
Sample B Female 61.3
Sample C Male 58.0
Sample D Male 45.7
Subiculum
nTPM: 45.4
Samples: 4

Max nTPM: 61.1
Min nTPM: 38.3
Sample A Female 61.1
Sample B Female 40.2
Sample C Male 42.0
Sample D Male 38.3
Ventral hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 58.4
Min nTPM: 33.8
Sample A Female 42.8
Sample B Female 33.8
Sample C Male 58.4
Sample D Male 49.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 133.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 133.8
Samples: 4

Max nTPM: 137.5
Min nTPM: 127.6
Sample A Male 135.6
Sample B Male 127.6
Sample C Female 137.5
Sample D Female 134.6
Hippocampal formation
nTPM: 128.7
Samples: 4

Max nTPM: 137.2
Min nTPM: 118.8
Sample A Male 137.2
Sample B Male 118.8
Sample C Female 129.0
Sample D Female 129.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
68668048 Antisense, RP_050203_01_C11, Mouse strain C57BL/6J (56 days, male) 10.0

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