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IRF2BPL
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.1 nTPM
HPA:14.1 nTPM
GTEx:13.2 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Mouse:17.3 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050862
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.1
Sample id Sample description nTPM
Hippocampus
nTPM: 12.5
1898 Male, age 80, left hemisphere 16.9
2148 Female, age 91, left hemisphere 13.5
2621 Female, age 67, right hemisphere 12.1
2529 Female, age 94, left hemisphere 11.9
1911 Female, age 85, right hemisphere 11.5
1855 Male, age 76, left hemisphere 9.0
Dentate gyrus
nTPM: 11.9
1927 Female, age 91, both hemispheres 14.0
2528 Male, age 74, both hemispheres 12.8
2531 Female, age 67, both hemispheres 12.3
2530 Female, age 94, left hemisphere 11.7
2246 Female, age 85, both hemispheres 10.8
2010 Male, age 76, both hemispheres 9.9
Entorhinal gyrus
nTPM: 10.1
2764 Male, age 80, right hemisphere 13.1
2117 Female, age 91, right hemisphere 13.0
1938 Female, age 85, left hemisphere 10.2
2613 Female, age 94, left hemisphere 9.4
2686 Male, age 75, right hemisphere 7.7
1787 Male, age 76, left hemisphere 7.2
Hippocampus, CA1
nTPM: 14.1
2749 Male, age 80, left hemisphere 23.5
1873 Female, age 85, both hemispheres 16.3
2527 Male, age 74, both hemispheres 12.0
2045 Male, age 76, both hemispheres 9.5
2082 Female, age 91, right hemisphere 9.5
Hippocampus, CA2
nTPM: 12.0
1963 Male, age 80, left hemisphere 17.8
2249 Male, age 74, both hemispheres 13.8
1892 Male, age 76, both hemispheres 11.1
1940 Female, age 85, left hemisphere 10.4
2113 Female, age 91, right hemisphere 9.6
2437 Female, age 94, left hemisphere 9.3
Hippocampus, CA3
nTPM: 13.9
2620 Female, age 94, left hemisphere 19.1
2861 Female, age 67, both hemispheres 17.4
2137 Male, age 80, left hemisphere 15.2
1867 Male, age 76, both hemispheres 12.2
2436 Male, age 74, both hemispheres 11.0
1891 Female, age 85, both hemispheres 8.3
Parahippocampal cortex
nTPM: 8.7
2245 Female, age 91, both hemispheres 12.4
2250 Female, age 67, right hemisphere 10.9
2532 Female, age 72, left hemisphere 10.6
1933 Female, age 85, both hemispheres 10.1
1990 Female, age 91, right hemisphere 9.0
2622 Female, age 67, right hemisphere 8.3
2018 Male, age 76, both hemispheres 6.7
2692 Male, age 74, both hemispheres 6.6
1850 Male, age 80, both hemispheres 6.4
2693 Female, age 94, both hemispheres 6.2
Perirhinal gyrus
nTPM: 8.5
1794 Male, age 80, right hemisphere 10.3
1841 Female, age 85, right hemisphere 10.2
1847 Female, age 91, left hemisphere 9.3
2521 Female, age 94, right hemisphere 7.3
2848 Male, age 76, right hemisphere 5.5
Subiculum
nTPM: 9.5
2729 Female, age 91, right hemisphere 11.4
1977 Female, age 85, both hemispheres 10.8
1901 Male, age 80, both hemispheres 10.0
2042 Male, age 76, both hemispheres 9.5
2619 Male, age 74, both hemispheres 8.2
2438 Female, age 94, left hemisphere 6.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 29.1
Min nTPM: 5.9
Std nTPM: 3.8
Median nTPM: 12.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 29.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 28.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 25.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 23.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 22.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 21.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 20.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 20.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 20.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 20.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 20.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.8
FF:10153-102I9 76 years, female 43.6
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 20.9
Min nTPM: 13.0
Sample A Male 18.7
Sample B Male 20.9
Sample C Female 13.0
Sample D Female 16.6
Hippocampal formation
nTPM: 14.8
Samples: 4

Max nTPM: 17.2
Min nTPM: 13.6
Sample A Male 13.9
Sample B Male 17.2
Sample C Female 13.6
Sample D Female 14.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
69444927 Antisense, RP_050414_04_H09, Mouse strain C57BL/6J (56 days, male) 4.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.