ABOUTMENU
HELP
NEWS
SLIRP
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:249.8 nTPM
HPA:249.8 nTPM
GTEx:199.7 nTPM
FANTOM5:191.2 Scaled Tags Per Million
Pig:23.8 nTPM
Mouse:41.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020291
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 249.8
Sample id Sample description nTPM
Hippocampus
nTPM: 236.7
1898 Male, age 80, left hemisphere 246.5
2621 Female, age 67, right hemisphere 237.3
1911 Female, age 85, right hemisphere 235.7
2529 Female, age 94, left hemisphere 235.4
1855 Male, age 76, left hemisphere 235.2
2148 Female, age 91, left hemisphere 229.9
Dentate gyrus
nTPM: 237.4
2010 Male, age 76, both hemispheres 246.4
2246 Female, age 85, both hemispheres 240.1
1927 Female, age 91, both hemispheres 237.4
2530 Female, age 94, left hemisphere 234.9
2528 Male, age 74, both hemispheres 233.3
2531 Female, age 67, both hemispheres 232.2
Entorhinal gyrus
nTPM: 237.7
1938 Female, age 85, left hemisphere 245.2
2764 Male, age 80, right hemisphere 244.5
1787 Male, age 76, left hemisphere 240.4
2613 Female, age 94, left hemisphere 233.5
2686 Male, age 75, right hemisphere 231.4
2117 Female, age 91, right hemisphere 231.1
Hippocampus, CA1
nTPM: 239.8
2749 Male, age 80, left hemisphere 249.0
2045 Male, age 76, both hemispheres 242.8
1873 Female, age 85, both hemispheres 237.1
2082 Female, age 91, right hemisphere 236.0
2527 Male, age 74, both hemispheres 234.3
Hippocampus, CA2
nTPM: 238.6
1892 Male, age 76, both hemispheres 249.5
1963 Male, age 80, left hemisphere 245.0
2113 Female, age 91, right hemisphere 235.4
2437 Female, age 94, left hemisphere 234.1
2249 Male, age 74, both hemispheres 233.9
1940 Female, age 85, left hemisphere 233.8
Hippocampus, CA3
nTPM: 233.8
1867 Male, age 76, both hemispheres 247.3
2137 Male, age 80, left hemisphere 235.6
1891 Female, age 85, both hemispheres 234.4
2436 Male, age 74, both hemispheres 232.3
2620 Female, age 94, left hemisphere 228.3
2861 Female, age 67, both hemispheres 225.1
Parahippocampal cortex
nTPM: 239.6
1933 Female, age 85, both hemispheres 247.3
1850 Male, age 80, both hemispheres 245.7
2018 Male, age 76, both hemispheres 245.6
2250 Female, age 67, right hemisphere 242.4
1990 Female, age 91, right hemisphere 240.5
2245 Female, age 91, both hemispheres 237.7
2532 Female, age 72, left hemisphere 237.5
2693 Female, age 94, both hemispheres 235.1
2692 Male, age 74, both hemispheres 234.5
2622 Female, age 67, right hemisphere 229.9
Perirhinal gyrus
nTPM: 249.8
1841 Female, age 85, right hemisphere 256.4
1847 Female, age 91, left hemisphere 253.9
1794 Male, age 80, right hemisphere 252.3
2848 Male, age 76, right hemisphere 244.5
2521 Female, age 94, right hemisphere 242.0
Subiculum
nTPM: 238.8
1977 Female, age 85, both hemispheres 250.2
2042 Male, age 76, both hemispheres 240.0
2619 Male, age 74, both hemispheres 237.3
2438 Female, age 94, left hemisphere 236.9
1901 Male, age 80, both hemispheres 236.4
2729 Female, age 91, right hemisphere 231.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 199.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 199.7
Samples: 197

Max nTPM: 691.4
Min nTPM: 99.4
Std nTPM: 65.8
Median nTPM: 194.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 691.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 406.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 399.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 369.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 367.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 345.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 327.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 324.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 316.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 303.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 298.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 191.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 191.2
FF:10169-103B7 60 years, female 231.2
FF:10153-102I9 76 years, female 151.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 32.9
Min nTPM: 17.9
Sample A Female 32.9
Sample B Female 21.9
Sample C Male 22.3
Sample D Male 17.9
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 31.8
Min nTPM: 13.8
Sample A Female 15.8
Sample B Female 31.8
Sample C Male 21.1
Sample D Male 13.8
Subiculum
nTPM: 19.9
Samples: 4

Max nTPM: 32.3
Min nTPM: 12.5
Sample A Female 32.3
Sample B Female 18.6
Sample C Male 12.5
Sample D Male 16.3
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 22.6
Min nTPM: 17.0
Sample A Female 22.6
Sample B Female 17.0
Sample C Male 17.4
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 42.4
Min nTPM: 30.5
Sample A Male 30.5
Sample B Male 34.4
Sample C Female 42.4
Sample D Female 31.5
Hippocampal formation
nTPM: 41.9
Samples: 4

Max nTPM: 47.7
Min nTPM: 35.2
Sample A Male 47.7
Sample B Male 35.2
Sample C Female 38.4
Sample D Female 46.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
75198184 Antisense, RP_060502_02_B05, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.