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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:31.9 nTPM
HPA:31.9 nTPM
GTEx:28.2 nTPM
FANTOM5:86.1 Scaled Tags Per Million
Pig:8.1 nTPM
Mouse:12.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039565
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.9
1898 Male, age 80, left hemisphere 30.5
2529 Female, age 94, left hemisphere 30.3
1855 Male, age 76, left hemisphere 29.9
2621 Female, age 67, right hemisphere 29.9
2148 Female, age 91, left hemisphere 29.6
1911 Female, age 85, right hemisphere 29.1
Dentate gyrus
nTPM: 30.1
2010 Male, age 76, both hemispheres 31.1
2531 Female, age 67, both hemispheres 30.6
1927 Female, age 91, both hemispheres 30.5
2246 Female, age 85, both hemispheres 30.1
2528 Male, age 74, both hemispheres 29.4
2530 Female, age 94, left hemisphere 28.8
Entorhinal gyrus
nTPM: 30.2
2764 Male, age 80, right hemisphere 31.2
2686 Male, age 75, right hemisphere 30.8
2613 Female, age 94, left hemisphere 30.2
1787 Male, age 76, left hemisphere 29.6
2117 Female, age 91, right hemisphere 29.6
1938 Female, age 85, left hemisphere 29.5
Hippocampus, CA1
nTPM: 31.1
2749 Male, age 80, left hemisphere 33.9
2045 Male, age 76, both hemispheres 31.4
1873 Female, age 85, both hemispheres 31.0
2082 Female, age 91, right hemisphere 30.1
2527 Male, age 74, both hemispheres 29.0
Hippocampus, CA2
nTPM: 30.5
1892 Male, age 76, both hemispheres 32.4
2249 Male, age 74, both hemispheres 31.1
1940 Female, age 85, left hemisphere 30.5
1963 Male, age 80, left hemisphere 29.8
2113 Female, age 91, right hemisphere 29.5
2437 Female, age 94, left hemisphere 29.4
Hippocampus, CA3
nTPM: 31.9
2620 Female, age 94, left hemisphere 34.3
2436 Male, age 74, both hemispheres 33.9
2137 Male, age 80, left hemisphere 32.7
1867 Male, age 76, both hemispheres 31.8
1891 Female, age 85, both hemispheres 29.9
2861 Female, age 67, both hemispheres 28.5
Parahippocampal cortex
nTPM: 30.8
1850 Male, age 80, both hemispheres 32.8
2622 Female, age 67, right hemisphere 32.0
1990 Female, age 91, right hemisphere 31.0
2692 Male, age 74, both hemispheres 30.9
2693 Female, age 94, both hemispheres 30.7
2532 Female, age 72, left hemisphere 30.6
2018 Male, age 76, both hemispheres 30.5
1933 Female, age 85, both hemispheres 30.1
2245 Female, age 91, both hemispheres 30.1
2250 Female, age 67, right hemisphere 29.1
Perirhinal gyrus
nTPM: 31.6
1794 Male, age 80, right hemisphere 32.6
1847 Female, age 91, left hemisphere 32.4
1841 Female, age 85, right hemisphere 31.7
2521 Female, age 94, right hemisphere 30.9
2848 Male, age 76, right hemisphere 30.6
Subiculum
nTPM: 30.2
2438 Female, age 94, left hemisphere 31.4
1901 Male, age 80, both hemispheres 30.7
1977 Female, age 85, both hemispheres 30.3
2042 Male, age 76, both hemispheres 29.9
2729 Female, age 91, right hemisphere 29.4
2619 Male, age 74, both hemispheres 29.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 38.3
Min nTPM: 12.5
Std nTPM: 4.7
Median nTPM: 28.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 38.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 37.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 36.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 35.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 35.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 35.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 35.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 35.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 35.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 35.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.1
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 67.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 8.6
Min nTPM: 7.3
Sample A Female 8.6
Sample B Female 8.3
Sample C Male 8.1
Sample D Male 7.3
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.7
Sample A Female 8.0
Sample B Female 7.6
Sample C Male 7.2
Sample D Male 5.7
Subiculum
nTPM: 7.8
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.8
Sample A Female 9.4
Sample B Female 7.3
Sample C Male 7.6
Sample D Male 6.8
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.7
Sample A Female 7.8
Sample B Female 6.7
Sample C Male 9.1
Sample D Male 7.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.9
Sample A Male 12.6
Sample B Male 10.9
Sample C Female 12.9
Sample D Female 12.9
Hippocampal formation
nTPM: 12.9
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.5
Sample A Male 11.5
Sample B Male 13.2
Sample C Female 14.8
Sample D Female 12.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68795460 Antisense, RP_050111_01_G05, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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