ABOUTMENU
HELP
NEWS
CNRIP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:65.1 nTPM
HPA:65.1 nTPM
GTEx:58.4 nTPM
FANTOM5:98.7 Scaled Tags Per Million
Pig:118.9 nTPM
Mouse:107.4 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.1
Sample id Sample description nTPM
Hippocampus
nTPM: 56.9
1898 Male, age 80, left hemisphere 70.8
1855 Male, age 76, left hemisphere 58.8
2148 Female, age 91, left hemisphere 54.6
2621 Female, age 67, right hemisphere 53.8
1911 Female, age 85, right hemisphere 53.3
2529 Female, age 94, left hemisphere 50.0
Dentate gyrus
nTPM: 58.7
1927 Female, age 91, both hemispheres 69.4
2530 Female, age 94, left hemisphere 57.8
2531 Female, age 67, both hemispheres 57.5
2010 Male, age 76, both hemispheres 57.1
2246 Female, age 85, both hemispheres 55.4
2528 Male, age 74, both hemispheres 55.0
Entorhinal gyrus
nTPM: 59.7
1938 Female, age 85, left hemisphere 70.2
2613 Female, age 94, left hemisphere 66.4
2764 Male, age 80, right hemisphere 64.9
1787 Male, age 76, left hemisphere 57.0
2686 Male, age 75, right hemisphere 53.7
2117 Female, age 91, right hemisphere 46.1
Hippocampus, CA1
nTPM: 62.9
2749 Male, age 80, left hemisphere 84.4
1873 Female, age 85, both hemispheres 66.6
2045 Male, age 76, both hemispheres 64.6
2527 Male, age 74, both hemispheres 55.0
2082 Female, age 91, right hemisphere 44.0
Hippocampus, CA2
nTPM: 55.6
1963 Male, age 80, left hemisphere 68.0
1892 Male, age 76, both hemispheres 63.5
2437 Female, age 94, left hemisphere 56.2
2249 Male, age 74, both hemispheres 51.7
2113 Female, age 91, right hemisphere 47.4
1940 Female, age 85, left hemisphere 46.7
Hippocampus, CA3
nTPM: 61.1
2137 Male, age 80, left hemisphere 77.2
2620 Female, age 94, left hemisphere 70.8
2861 Female, age 67, both hemispheres 61.3
1867 Male, age 76, both hemispheres 55.3
1891 Female, age 85, both hemispheres 52.1
2436 Male, age 74, both hemispheres 49.9
Parahippocampal cortex
nTPM: 57.1
1850 Male, age 80, both hemispheres 65.0
1933 Female, age 85, both hemispheres 61.7
2245 Female, age 91, both hemispheres 59.2
2693 Female, age 94, both hemispheres 58.7
2532 Female, age 72, left hemisphere 58.1
1990 Female, age 91, right hemisphere 57.6
2622 Female, age 67, right hemisphere 54.9
2250 Female, age 67, right hemisphere 53.9
2018 Male, age 76, both hemispheres 51.4
2692 Male, age 74, both hemispheres 50.9
Perirhinal gyrus
nTPM: 65.1
1847 Female, age 91, left hemisphere 72.0
1794 Male, age 80, right hemisphere 67.5
1841 Female, age 85, right hemisphere 66.4
2848 Male, age 76, right hemisphere 63.6
2521 Female, age 94, right hemisphere 56.1
Subiculum
nTPM: 50.7
1977 Female, age 85, both hemispheres 58.9
1901 Male, age 80, both hemispheres 55.0
2619 Male, age 74, both hemispheres 50.1
2729 Female, age 91, right hemisphere 48.5
2042 Male, age 76, both hemispheres 46.8
2438 Female, age 94, left hemisphere 45.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.4
Samples: 197

Max nTPM: 147.3
Min nTPM: 15.8
Std nTPM: 25.2
Median nTPM: 54.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 147.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 129.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 121.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 114.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 112.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 111.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 110.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 109.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 109.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 107.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 105.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.7
FF:10169-103B7 60 years, female 125.5
FF:10153-102I9 76 years, female 71.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 118.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 119.0
Samples: 4

Max nTPM: 174.1
Min nTPM: 69.9
Sample A Female 174.1
Sample B Female 132.6
Sample C Male 69.9
Sample D Male 99.2
Entorhinal cortex
nTPM: 65.0
Samples: 4

Max nTPM: 67.9
Min nTPM: 59.2
Sample A Female 65.7
Sample B Female 67.9
Sample C Male 67.2
Sample D Male 59.2
Subiculum
nTPM: 74.3
Samples: 4

Max nTPM: 94.8
Min nTPM: 62.4
Sample A Female 94.8
Sample B Female 68.2
Sample C Male 71.8
Sample D Male 62.4
Ventral hippocampus
nTPM: 113.0
Samples: 4

Max nTPM: 129.3
Min nTPM: 75.5
Sample A Female 118.3
Sample B Female 75.5
Sample C Male 129.0
Sample D Male 129.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.0
Samples: 4

Max nTPM: 99.9
Min nTPM: 79.3
Sample A Male 79.3
Sample B Male 99.0
Sample C Female 97.8
Sample D Female 99.9
Hippocampal formation
nTPM: 107.4
Samples: 4

Max nTPM: 118.1
Min nTPM: 102.9
Sample A Male 118.1
Sample B Male 104.3
Sample C Female 104.1
Sample D Female 102.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
71211578 Antisense, RP_050816_01_H02, Mouse strain C57BL/6J (56 days, male) 14.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.