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KDM3B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:21.3 nTPM
HPA:21.3 nTPM
GTEx:17.0 nTPM
FANTOM5:19.9 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:14.7 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016610
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.3
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
2529 Female, age 94, left hemisphere 23.0
1911 Female, age 85, right hemisphere 22.0
2148 Female, age 91, left hemisphere 21.7
2621 Female, age 67, right hemisphere 21.0
1855 Male, age 76, left hemisphere 20.1
1898 Male, age 80, left hemisphere 19.9
Dentate gyrus
nTPM: 20.4
2531 Female, age 67, both hemispheres 21.9
2246 Female, age 85, both hemispheres 20.9
2010 Male, age 76, both hemispheres 20.2
2528 Male, age 74, both hemispheres 20.1
2530 Female, age 94, left hemisphere 20.0
1927 Female, age 91, both hemispheres 19.0
Entorhinal gyrus
nTPM: 21.1
1787 Male, age 76, left hemisphere 22.1
2117 Female, age 91, right hemisphere 22.0
1938 Female, age 85, left hemisphere 21.5
2764 Male, age 80, right hemisphere 20.9
2613 Female, age 94, left hemisphere 20.1
2686 Male, age 75, right hemisphere 20.1
Hippocampus, CA1
nTPM: 20.2
1873 Female, age 85, both hemispheres 21.3
2527 Male, age 74, both hemispheres 21.1
2749 Male, age 80, left hemisphere 20.1
2045 Male, age 76, both hemispheres 19.7
2082 Female, age 91, right hemisphere 19.1
Hippocampus, CA2
nTPM: 20.6
1963 Male, age 80, left hemisphere 22.5
2113 Female, age 91, right hemisphere 20.8
1892 Male, age 76, both hemispheres 20.5
1940 Female, age 85, left hemisphere 20.4
2437 Female, age 94, left hemisphere 20.4
2249 Male, age 74, both hemispheres 19.1
Hippocampus, CA3
nTPM: 20.7
2861 Female, age 67, both hemispheres 22.3
2620 Female, age 94, left hemisphere 21.8
1891 Female, age 85, both hemispheres 21.3
2137 Male, age 80, left hemisphere 21.2
1867 Male, age 76, both hemispheres 19.3
2436 Male, age 74, both hemispheres 18.1
Parahippocampal cortex
nTPM: 20.2
1850 Male, age 80, both hemispheres 21.5
2622 Female, age 67, right hemisphere 21.0
2692 Male, age 74, both hemispheres 20.9
1990 Female, age 91, right hemisphere 20.4
1933 Female, age 85, both hemispheres 20.2
2245 Female, age 91, both hemispheres 20.1
2018 Male, age 76, both hemispheres 20.0
2532 Female, age 72, left hemisphere 19.9
2693 Female, age 94, both hemispheres 19.2
2250 Female, age 67, right hemisphere 18.8
Perirhinal gyrus
nTPM: 20.8
1794 Male, age 80, right hemisphere 21.6
2848 Male, age 76, right hemisphere 21.2
1841 Female, age 85, right hemisphere 21.0
1847 Female, age 91, left hemisphere 20.3
2521 Female, age 94, right hemisphere 19.9
Subiculum
nTPM: 20.4
1977 Female, age 85, both hemispheres 21.3
2619 Male, age 74, both hemispheres 20.9
2729 Female, age 91, right hemisphere 20.9
2438 Female, age 94, left hemisphere 20.2
1901 Male, age 80, both hemispheres 19.9
2042 Male, age 76, both hemispheres 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.0
Samples: 197

Max nTPM: 25.4
Min nTPM: 8.3
Std nTPM: 2.8
Median nTPM: 16.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 25.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 23.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 22.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 22.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 22.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 22.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 22.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 22.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 22.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.9
FF:10153-102I9 76 years, female 25.3
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.3
Sample A Female 17.9
Sample B Female 16.6
Sample C Male 15.5
Sample D Male 13.3
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 17.1
Min nTPM: 14.7
Sample A Female 17.1
Sample B Female 15.2
Sample C Male 16.0
Sample D Male 14.7
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.4
Sample A Female 20.3
Sample B Female 17.3
Sample C Male 16.2
Sample D Male 15.4
Ventral hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 20.1
Min nTPM: 13.6
Sample A Female 14.1
Sample B Female 13.6
Sample C Male 20.1
Sample D Male 18.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 15.7
Min nTPM: 13.1
Sample A Male 15.1
Sample B Male 15.1
Sample C Female 13.1
Sample D Female 15.7
Hippocampal formation
nTPM: 13.4
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.5
Sample A Male 11.5
Sample B Male 14.0
Sample C Female 14.7
Sample D Female 13.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
70813119 Antisense, RP_050712_03_C01, Mouse strain C57BL/6J (56 days, male) 3.8
71210995 Antisense, RP_050816_01_A05, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.