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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:27.1 nTPM
HPA:27.1 nTPM
GTEx:25.6 nTPM
FANTOM5:109.5 Scaled Tags Per Million
Pig:26.3 nTPM
Mouse:175.3 nTPM
Allen mouse:10.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073012
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.1
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
1898 Male, age 80, left hemisphere 27.8
2621 Female, age 67, right hemisphere 23.6
1855 Male, age 76, left hemisphere 21.9
1911 Female, age 85, right hemisphere 21.8
2529 Female, age 94, left hemisphere 21.3
2148 Female, age 91, left hemisphere 20.4
Dentate gyrus
nTPM: 22.2
1927 Female, age 91, both hemispheres 25.7
2246 Female, age 85, both hemispheres 23.3
2010 Male, age 76, both hemispheres 22.9
2528 Male, age 74, both hemispheres 22.8
2530 Female, age 94, left hemisphere 19.5
2531 Female, age 67, both hemispheres 19.1
Entorhinal gyrus
nTPM: 22.1
1938 Female, age 85, left hemisphere 26.3
2764 Male, age 80, right hemisphere 23.9
1787 Male, age 76, left hemisphere 23.5
2117 Female, age 91, right hemisphere 22.2
2686 Male, age 75, right hemisphere 18.4
2613 Female, age 94, left hemisphere 18.2
Hippocampus, CA1
nTPM: 24.4
2749 Male, age 80, left hemisphere 29.5
2527 Male, age 74, both hemispheres 25.7
1873 Female, age 85, both hemispheres 25.4
2082 Female, age 91, right hemisphere 21.3
2045 Male, age 76, both hemispheres 20.1
Hippocampus, CA2
nTPM: 23.6
1892 Male, age 76, both hemispheres 28.5
2249 Male, age 74, both hemispheres 26.4
1940 Female, age 85, left hemisphere 23.5
1963 Male, age 80, left hemisphere 21.6
2113 Female, age 91, right hemisphere 21.1
2437 Female, age 94, left hemisphere 20.1
Hippocampus, CA3
nTPM: 23.5
2436 Male, age 74, both hemispheres 30.0
2137 Male, age 80, left hemisphere 27.2
1867 Male, age 76, both hemispheres 24.3
1891 Female, age 85, both hemispheres 22.1
2620 Female, age 94, left hemisphere 19.8
2861 Female, age 67, both hemispheres 17.8
Parahippocampal cortex
nTPM: 24.6
1850 Male, age 80, both hemispheres 28.7
1933 Female, age 85, both hemispheres 27.3
2250 Female, age 67, right hemisphere 27.0
2532 Female, age 72, left hemisphere 25.6
1990 Female, age 91, right hemisphere 24.8
2692 Male, age 74, both hemispheres 23.8
2245 Female, age 91, both hemispheres 23.7
2018 Male, age 76, both hemispheres 22.3
2693 Female, age 94, both hemispheres 22.0
2622 Female, age 67, right hemisphere 20.7
Perirhinal gyrus
nTPM: 27.1
1847 Female, age 91, left hemisphere 31.2
1841 Female, age 85, right hemisphere 28.4
1794 Male, age 80, right hemisphere 27.5
2848 Male, age 76, right hemisphere 26.0
2521 Female, age 94, right hemisphere 22.4
Subiculum
nTPM: 22.7
2438 Female, age 94, left hemisphere 26.3
1901 Male, age 80, both hemispheres 25.4
1977 Female, age 85, both hemispheres 24.5
2619 Male, age 74, both hemispheres 21.0
2042 Male, age 76, both hemispheres 20.5
2729 Female, age 91, right hemisphere 18.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.6
Samples: 197

Max nTPM: 45.1
Min nTPM: 15.6
Std nTPM: 5.5
Median nTPM: 24.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 45.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 40.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 40.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 40.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 40.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 36.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 35.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 35.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 35.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.5
FF:10169-103B7 60 years, female 137.0
FF:10153-102I9 76 years, female 82.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.1
Sample A Female 29.5
Sample B Female 25.6
Sample C Male 28.8
Sample D Male 21.1
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.1
Sample A Female 25.4
Sample B Female 27.5
Sample C Male 24.1
Sample D Male 22.1
Subiculum
nTPM: 25.9
Samples: 4

Max nTPM: 29.7
Min nTPM: 23.9
Sample A Female 29.7
Sample B Female 24.8
Sample C Male 25.2
Sample D Male 23.9
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 25.3
Min nTPM: 20.7
Sample A Female 24.6
Sample B Female 20.7
Sample C Male 25.3
Sample D Male 24.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 175.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 160.8
Samples: 4

Max nTPM: 173.7
Min nTPM: 149.1
Sample A Male 154.3
Sample B Male 173.7
Sample C Female 166.2
Sample D Female 149.1
Hippocampal formation
nTPM: 175.3
Samples: 4

Max nTPM: 203.6
Min nTPM: 163.1
Sample A Male 203.6
Sample B Male 167.2
Sample C Female 167.3
Sample D Female 163.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.5
69526862 Antisense, RP_050421_01_G08, Mouse strain C57BL/6J (56 days, male) 10.5

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The Human Protein Atlas

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