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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:26.6 nTPM
HPA:26.6 nTPM
GTEx:22.7 nTPM
FANTOM5:66.7 Scaled Tags Per Million
Pig:45.4 nTPM
Mouse:54.4 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051282Antibody HPA055838Antibody CAB001515
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
1855 Male, age 76, left hemisphere 28.1
1911 Female, age 85, right hemisphere 27.0
2529 Female, age 94, left hemisphere 26.6
1898 Male, age 80, left hemisphere 25.6
2621 Female, age 67, right hemisphere 25.5
2148 Female, age 91, left hemisphere 24.1
Dentate gyrus
nTPM: 24.7
2528 Male, age 74, both hemispheres 27.3
2010 Male, age 76, both hemispheres 27.2
2246 Female, age 85, both hemispheres 24.9
2530 Female, age 94, left hemisphere 23.6
2531 Female, age 67, both hemispheres 22.8
1927 Female, age 91, both hemispheres 22.4
Entorhinal gyrus
nTPM: 24.2
2117 Female, age 91, right hemisphere 31.8
1787 Male, age 76, left hemisphere 24.4
1938 Female, age 85, left hemisphere 24.3
2764 Male, age 80, right hemisphere 23.2
2686 Male, age 75, right hemisphere 21.4
2613 Female, age 94, left hemisphere 20.3
Hippocampus, CA1
nTPM: 24.9
2527 Male, age 74, both hemispheres 28.6
2082 Female, age 91, right hemisphere 26.2
1873 Female, age 85, both hemispheres 24.9
2045 Male, age 76, both hemispheres 24.5
2749 Male, age 80, left hemisphere 20.6
Hippocampus, CA2
nTPM: 26.0
2249 Male, age 74, both hemispheres 32.0
1940 Female, age 85, left hemisphere 26.9
2113 Female, age 91, right hemisphere 26.4
1963 Male, age 80, left hemisphere 23.9
2437 Female, age 94, left hemisphere 23.9
1892 Male, age 76, both hemispheres 22.6
Hippocampus, CA3
nTPM: 24.4
2436 Male, age 74, both hemispheres 29.3
1891 Female, age 85, both hemispheres 27.6
1867 Male, age 76, both hemispheres 25.0
2620 Female, age 94, left hemisphere 22.1
2861 Female, age 67, both hemispheres 22.0
2137 Male, age 80, left hemisphere 20.4
Parahippocampal cortex
nTPM: 24.3
2018 Male, age 76, both hemispheres 26.9
2250 Female, age 67, right hemisphere 26.4
2692 Male, age 74, both hemispheres 25.0
1990 Female, age 91, right hemisphere 24.7
1933 Female, age 85, both hemispheres 24.3
2532 Female, age 72, left hemisphere 24.0
2245 Female, age 91, both hemispheres 23.6
1850 Male, age 80, both hemispheres 22.7
2693 Female, age 94, both hemispheres 22.6
2622 Female, age 67, right hemisphere 22.2
Perirhinal gyrus
nTPM: 23.1
2521 Female, age 94, right hemisphere 24.2
1841 Female, age 85, right hemisphere 23.5
1847 Female, age 91, left hemisphere 23.4
1794 Male, age 80, right hemisphere 22.3
2848 Male, age 76, right hemisphere 21.9
Subiculum
nTPM: 26.6
2619 Male, age 74, both hemispheres 28.2
2729 Female, age 91, right hemisphere 28.2
2042 Male, age 76, both hemispheres 27.2
1901 Male, age 80, both hemispheres 26.4
1977 Female, age 85, both hemispheres 25.2
2438 Female, age 94, left hemisphere 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.7
Samples: 197

Max nTPM: 52.2
Min nTPM: 5.7
Std nTPM: 8.6
Median nTPM: 21.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 52.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 49.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 47.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 46.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 42.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 41.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 40.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 39.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 39.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 39.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 38.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.7
FF:10153-102I9 76 years, female 81.2
FF:10169-103B7 60 years, female 52.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.1
Samples: 4

Max nTPM: 59.8
Min nTPM: 30.2
Sample A Female 59.8
Sample B Female 39.0
Sample C Male 43.3
Sample D Male 30.2
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 38.3
Min nTPM: 28.1
Sample A Female 36.9
Sample B Female 38.3
Sample C Male 35.4
Sample D Male 28.1
Subiculum
nTPM: 45.4
Samples: 4

Max nTPM: 54.5
Min nTPM: 39.8
Sample A Female 54.5
Sample B Female 46.5
Sample C Male 39.8
Sample D Male 40.8
Ventral hippocampus
nTPM: 44.1
Samples: 4

Max nTPM: 48.3
Min nTPM: 39.7
Sample A Female 48.3
Sample B Female 39.7
Sample C Male 48.3
Sample D Male 40.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.6
Samples: 4

Max nTPM: 45.7
Min nTPM: 40.3
Sample A Male 45.7
Sample B Male 40.3
Sample C Female 45.5
Sample D Female 42.8
Hippocampal formation
nTPM: 54.5
Samples: 4

Max nTPM: 62.7
Min nTPM: 49.1
Sample A Male 49.1
Sample B Male 49.8
Sample C Female 62.7
Sample D Female 56.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
70919370 Antisense, RP_050713_01_B11, Mouse strain C57BL/6J (56 days, male) 2.0

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