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GTF3A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:52.8 nTPM
HPA:52.8 nTPM
GTEx:52.5 nTPM
FANTOM5:113.2 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:25.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007990
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
1898 Male, age 80, left hemisphere 54.8
1855 Male, age 76, left hemisphere 53.5
2529 Female, age 94, left hemisphere 51.9
2621 Female, age 67, right hemisphere 50.8
1911 Female, age 85, right hemisphere 50.0
2148 Female, age 91, left hemisphere 49.9
Dentate gyrus
nTPM: 51.8
2246 Female, age 85, both hemispheres 53.3
2010 Male, age 76, both hemispheres 52.8
2530 Female, age 94, left hemisphere 52.8
1927 Female, age 91, both hemispheres 52.7
2531 Female, age 67, both hemispheres 49.9
2528 Male, age 74, both hemispheres 49.3
Entorhinal gyrus
nTPM: 50.6
1787 Male, age 76, left hemisphere 54.0
2764 Male, age 80, right hemisphere 51.9
1938 Female, age 85, left hemisphere 51.1
2117 Female, age 91, right hemisphere 50.5
2613 Female, age 94, left hemisphere 48.9
2686 Male, age 75, right hemisphere 47.4
Hippocampus, CA1
nTPM: 52.7
2749 Male, age 80, left hemisphere 59.0
2045 Male, age 76, both hemispheres 53.9
2527 Male, age 74, both hemispheres 52.0
1873 Female, age 85, both hemispheres 51.5
2082 Female, age 91, right hemisphere 47.4
Hippocampus, CA2
nTPM: 52.8
1892 Male, age 76, both hemispheres 57.5
1963 Male, age 80, left hemisphere 54.0
2437 Female, age 94, left hemisphere 52.5
2249 Male, age 74, both hemispheres 51.9
1940 Female, age 85, left hemisphere 51.3
2113 Female, age 91, right hemisphere 49.6
Hippocampus, CA3
nTPM: 51.7
2137 Male, age 80, left hemisphere 56.0
1867 Male, age 76, both hemispheres 54.5
1891 Female, age 85, both hemispheres 50.5
2861 Female, age 67, both hemispheres 50.3
2436 Male, age 74, both hemispheres 49.6
2620 Female, age 94, left hemisphere 49.0
Parahippocampal cortex
nTPM: 50.3
2532 Female, age 72, left hemisphere 52.4
2018 Male, age 76, both hemispheres 52.2
1933 Female, age 85, both hemispheres 52.1
2245 Female, age 91, both hemispheres 51.9
2250 Female, age 67, right hemisphere 51.8
1850 Male, age 80, both hemispheres 50.7
1990 Female, age 91, right hemisphere 50.3
2622 Female, age 67, right hemisphere 47.6
2692 Male, age 74, both hemispheres 47.4
2693 Female, age 94, both hemispheres 46.9
Perirhinal gyrus
nTPM: 52.3
2521 Female, age 94, right hemisphere 54.6
1794 Male, age 80, right hemisphere 52.9
1847 Female, age 91, left hemisphere 52.7
1841 Female, age 85, right hemisphere 51.0
2848 Male, age 76, right hemisphere 50.1
Subiculum
nTPM: 51.2
1977 Female, age 85, both hemispheres 53.2
1901 Male, age 80, both hemispheres 52.8
2042 Male, age 76, both hemispheres 52.1
2438 Female, age 94, left hemisphere 50.9
2619 Male, age 74, both hemispheres 49.9
2729 Female, age 91, right hemisphere 48.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.5
Samples: 197

Max nTPM: 151.0
Min nTPM: 3.2
Std nTPM: 24.2
Median nTPM: 47.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 151.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 136.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 136.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 132.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 116.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 112.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 109.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 102.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 101.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 94.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 91.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.2
FF:10169-103B7 60 years, female 146.4
FF:10153-102I9 76 years, female 80.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.5
Sample A Female 9.2
Sample B Female 7.8
Sample C Male 8.5
Sample D Male 6.5
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.3
Sample A Female 8.5
Sample B Female 9.2
Sample C Male 9.6
Sample D Male 8.3
Subiculum
nTPM: 8.3
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.2
Sample A Female 9.2
Sample B Female 8.4
Sample C Male 8.3
Sample D Male 7.2
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.0
Sample A Female 8.8
Sample B Female 8.0
Sample C Male 10.6
Sample D Male 8.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.9
Samples: 4

Max nTPM: 27.9
Min nTPM: 24.7
Sample A Male 24.7
Sample B Male 26.1
Sample C Female 27.9
Sample D Female 24.7
Hippocampal formation
nTPM: 23.9
Samples: 4

Max nTPM: 29.2
Min nTPM: 21.1
Sample A Male 29.2
Sample B Male 21.1
Sample C Female 22.2
Sample D Female 22.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68162213 Antisense, RP_041122_01_H01, Mouse strain C57BL/6J (56 days, male) 0.1

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