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HNRNPA2B1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:105.0 nTPM
HPA:105.0 nTPM
GTEx:366.3 nTPM
FANTOM5:1070.2 Scaled Tags Per Million
Pig:171.8 nTPM
Mouse:350.0 nTPM
Allen mouse:0.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 105.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 100.2
1870 Female, age 42, unknown 105.6
1833 Male, age 53, unknown 103.6
1830 Male, age 51, unknown 102.6
2411 Female, age 72, unknown 102.3
2219 Male, age 76, both hemispheres 102.1
2019 Male, age 18, unknown 101.1
1827 Male, age 72, unknown 99.6
2828 Female, age 72, unknown 97.3
2666 Male, age 74, left hemisphere 96.8
2586 Male, age 75, left hemisphere 90.9
Dorsal raphe nucleus
nTPM: 98.9
2750 Male, age 76, both hemispheres 105.3
1828 Male, age 53, unknown 99.8
2016 Female, age 72, unknown 97.3
2047 Male, age 72, unknown 96.3
2298 Female, age 72, unknown 96.0
Inferior colliculus
nTPM: 102.0
2849 Male, age 72, unknown 104.0
1848 Female, age 42, unknown 102.1
1890 Male, age 53, unknown 101.1
2097 Female, age 72, unknown 100.8
Median raphe nucleus
nTPM: 103.8
2220 Male, age 76, midline 103.8
Pedunculopontine tegmental nucleus
nTPM: 105.0
2338 Male, age 61, both hemispheres 108.6
2334 Male, age 80, both hemispheres 104.9
1921 Female, age 85, both hemispheres 101.3
Periaquaductal grey, anterior
nTPM: 98.8
2502 Female, age 75, unknown 100.3
1947 Male, age 18, unknown 99.2
1795 Male, age 51, unknown 97.0
Periaquaductal grey, dorsal
nTPM: 102.4
2850 Male, age 76, both hemispheres 108.2
2464 Female, age 72, unknown 102.0
1831 Male, age 72, unknown 101.2
1840 Male, age 53, unknown 98.0
Periaquaductal grey, lateral
nTPM: 99.9
2140 Male, age 76, both hemispheres 103.2
2272 Male, age 74, both hemispheres 100.3
2053 Male, age 18, unknown 96.3
Pretectal area
nTPM: 101.4
2667 Female, age 75, unknown 106.6
1815 Male, age 53, unknown 103.6
2316 Male, age 76, right hemisphere 103.2
2825 Male, age 18, unknown 102.4
1816 Male, age 51, unknown 101.1
1817 Female, age 42, unknown 101.1
1944 Female, age 72, unknown 101.0
2224 Female, age 72, unknown 100.9
2007 Male, age 72, unknown 100.8
2273 Male, age 74, both hemispheres 99.8
2407 Male, age 75, both hemispheres 95.3
Red nucleus
nTPM: 103.8
2823 Male, age 76, right hemisphere 111.2
2503 Female, age 72, unknown 107.6
1954 Female, age 42, unknown 106.9
1904 Male, age 53, unknown 106.1
1865 Male, age 51, unknown 105.9
1821 Female, age 72, unknown 105.7
2725 Female, age 75, unknown 104.0
2785 Male, age 18, unknown 102.2
2227 Male, age 72, unknown 101.9
2769 Male, age 72, unknown 101.8
2588 Male, age 74, left hemisphere 97.6
2584 Male, age 75, left hemisphere 94.6
Substantia nigra
nTPM: 99.7
2699 Male, age 18, unknown 104.5
2241 Male, age 72, unknown 102.5
1889 Female, age 72, unknown 101.5
2409 Female, age 72, unknown 101.4
1941 Male, age 53, unknown 99.9
2665 Male, age 74, both hemispheres 99.8
1851 Male, age 51, unknown 98.3
1916 Female, age 42, unknown 97.8
2590 Female, age 75, unknown 95.7
2583 Male, age 75, right hemisphere 95.6
Superior colliculus
nTPM: 101.0
1913 Female, age 42, unknown 108.0
1895 Male, age 76, right hemisphere 106.7
1995 Male, age 72, unknown 102.6
2587 Male, age 74, left hemisphere 102.4
2087 Female, age 72, unknown 101.1
1839 Male, age 51, unknown 100.3
2668 Female, age 75, unknown 98.5
2261 Male, age 18, unknown 98.1
1796 Male, age 53, unknown 97.2
2664 Male, age 75, both hemispheres 95.2
Ventral tegmental area
nTPM: 100.1
2223 Female, age 72, unknown 103.0
2218 Male, age 76, both hemispheres 100.8
2410 Female, age 72, unknown 100.4
2021 Male, age 53, unknown 99.1
1942 Male, age 51, unknown 98.9
1915 Female, age 42, unknown 98.8

MIDBRAIN - GTEx RNA-seqi
Average nTPM 366.3
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 366.3
Samples: 139

Max nTPM: 746.7
Min nTPM: 241.0
Std nTPM: 79.7
Median nTPM: 353.6
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 746.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 596.7
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 589.7
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 579.8
GTEX-1HSMO-0011-R2a-SM-CL553 60-69 years, male 553.0
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 543.8
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 539.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ 70-79 years, male 528.4
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 509.9
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 497.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 491.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 1070.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 1070.2
FF:10158-103A5 76 years, female 1070.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 171.8
Pig sample Sample description nTPM
Midbrain
nTPM: 164.8
Samples: 4

Max nTPM: 206.1
Min nTPM: 138.7
Sample A Female 206.1
Sample B Female 170.5
Sample C Male 143.7
Sample D Male 138.7
Periaqueductal gray
nTPM: 171.8
Samples: 3

Max nTPM: 174.0
Min nTPM: 167.4
Sample B Female 173.9
Sample C Male 167.4
Sample D Male 174.0
Substantia nigra
nTPM: 155.0
Samples: 4

Max nTPM: 183.7
Min nTPM: 139.9
Sample A Female 139.9
Sample B Female 146.9
Sample C Male 149.3
Sample D Male 183.7
Superior colliculi
nTPM: 144.7
Samples: 4

Max nTPM: 163.3
Min nTPM: 124.0
Sample A Female 141.1
Sample B Female 124.0
Sample C Male 150.5
Sample D Male 163.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 350.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 350.0
Samples: 4

Max nTPM: 366.1
Min nTPM: 340.4
Sample A Male 341.3
Sample B Male 352.2
Sample C Female 366.1
Sample D Female 340.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.0
71232819 Antisense, RP_050503_02_A04, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.