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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.1 nTPM
HPA:10.1 nTPM
GTEx:9.6 nTPM
FANTOM5:120.4 Scaled Tags Per Million
Pig:46.1 nTPM
Mouse:121.3 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074383
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.1
Sample id Sample description nTPM
Hippocampus
nTPM: 7.7
1898 Male, age 80, left hemisphere 10.9
1855 Male, age 76, left hemisphere 8.2
1911 Female, age 85, right hemisphere 6.9
2621 Female, age 67, right hemisphere 6.9
2529 Female, age 94, left hemisphere 6.8
2148 Female, age 91, left hemisphere 6.6
Dentate gyrus
nTPM: 8.3
1927 Female, age 91, both hemispheres 9.7
2010 Male, age 76, both hemispheres 9.3
2528 Male, age 74, both hemispheres 8.2
2530 Female, age 94, left hemisphere 8.1
2246 Female, age 85, both hemispheres 8.0
2531 Female, age 67, both hemispheres 6.6
Entorhinal gyrus
nTPM: 7.9
1938 Female, age 85, left hemisphere 9.1
2764 Male, age 80, right hemisphere 8.6
2613 Female, age 94, left hemisphere 8.2
1787 Male, age 76, left hemisphere 7.6
2686 Male, age 75, right hemisphere 7.0
2117 Female, age 91, right hemisphere 6.8
Hippocampus, CA1
nTPM: 9.0
2749 Male, age 80, left hemisphere 11.2
1873 Female, age 85, both hemispheres 9.6
2045 Male, age 76, both hemispheres 8.9
2527 Male, age 74, both hemispheres 8.2
2082 Female, age 91, right hemisphere 7.1
Hippocampus, CA2
nTPM: 8.5
1892 Male, age 76, both hemispheres 11.2
1963 Male, age 80, left hemisphere 9.2
2249 Male, age 74, both hemispheres 8.2
2437 Female, age 94, left hemisphere 8.0
1940 Female, age 85, left hemisphere 7.5
2113 Female, age 91, right hemisphere 6.8
Hippocampus, CA3
nTPM: 8.3
2436 Male, age 74, both hemispheres 9.9
1867 Male, age 76, both hemispheres 9.4
2137 Male, age 80, left hemisphere 8.8
1891 Female, age 85, both hemispheres 8.1
2620 Female, age 94, left hemisphere 6.8
2861 Female, age 67, both hemispheres 6.5
Parahippocampal cortex
nTPM: 8.3
1850 Male, age 80, both hemispheres 10.6
1990 Female, age 91, right hemisphere 9.4
2693 Female, age 94, both hemispheres 9.4
2250 Female, age 67, right hemisphere 8.8
1933 Female, age 85, both hemispheres 8.7
2245 Female, age 91, both hemispheres 8.0
2018 Male, age 76, both hemispheres 7.7
2532 Female, age 72, left hemisphere 7.4
2692 Male, age 74, both hemispheres 7.4
2622 Female, age 67, right hemisphere 6.1
Perirhinal gyrus
nTPM: 10.1
1794 Male, age 80, right hemisphere 10.7
1847 Female, age 91, left hemisphere 10.6
1841 Female, age 85, right hemisphere 10.5
2848 Male, age 76, right hemisphere 9.9
2521 Female, age 94, right hemisphere 9.0
Subiculum
nTPM: 7.5
1977 Female, age 85, both hemispheres 8.8
1901 Male, age 80, both hemispheres 8.3
2438 Female, age 94, left hemisphere 7.4
2619 Male, age 74, both hemispheres 7.0
2729 Female, age 91, right hemisphere 7.0
2042 Male, age 76, both hemispheres 6.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.6
Samples: 197

Max nTPM: 34.8
Min nTPM: 2.9
Std nTPM: 4.2
Median nTPM: 8.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 20.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 19.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 19.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 18.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 18.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 16.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 16.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 16.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 16.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.4
FF:10169-103B7 60 years, female 177.8
FF:10153-102I9 76 years, female 63.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.1
Samples: 4

Max nTPM: 49.7
Min nTPM: 38.2
Sample A Female 49.7
Sample B Female 47.0
Sample C Male 49.5
Sample D Male 38.2
Entorhinal cortex
nTPM: 44.8
Samples: 4

Max nTPM: 51.0
Min nTPM: 42.2
Sample A Female 42.9
Sample B Female 51.0
Sample C Male 43.0
Sample D Male 42.2
Subiculum
nTPM: 45.0
Samples: 4

Max nTPM: 51.4
Min nTPM: 40.5
Sample A Female 51.4
Sample B Female 40.5
Sample C Male 44.0
Sample D Male 43.9
Ventral hippocampus
nTPM: 41.2
Samples: 4

Max nTPM: 45.8
Min nTPM: 37.5
Sample A Female 45.8
Sample B Female 37.5
Sample C Male 41.9
Sample D Male 39.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 116.8
Samples: 4

Max nTPM: 127.0
Min nTPM: 109.7
Sample A Male 109.7
Sample B Male 112.8
Sample C Female 117.7
Sample D Female 127.0
Hippocampal formation
nTPM: 121.3
Samples: 4

Max nTPM: 130.9
Min nTPM: 116.3
Sample A Male 130.9
Sample B Male 119.1
Sample C Female 118.8
Sample D Female 116.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
71627779 Antisense, RP_050927_03_B04, Mouse strain C57BL/6J (56 days, male) 9.3

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