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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:29.9 nTPM
HPA:29.9 nTPM
GTEx:30.0 nTPM
FANTOM5:100.3 Scaled Tags Per Million
Pig:33.7 nTPM
Mouse:44.6 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.1
2529 Female, age 94, left hemisphere 30.6
1855 Male, age 76, left hemisphere 30.2
1898 Male, age 80, left hemisphere 29.9
1911 Female, age 85, right hemisphere 28.5
2621 Female, age 67, right hemisphere 27.6
2148 Female, age 91, left hemisphere 27.5
Dentate gyrus
nTPM: 29.9
2530 Female, age 94, left hemisphere 37.2
2010 Male, age 76, both hemispheres 31.7
2246 Female, age 85, both hemispheres 29.2
2528 Male, age 74, both hemispheres 28.9
2531 Female, age 67, both hemispheres 27.4
1927 Female, age 91, both hemispheres 25.1
Entorhinal gyrus
nTPM: 29.7
2117 Female, age 91, right hemisphere 33.2
2764 Male, age 80, right hemisphere 31.5
1787 Male, age 76, left hemisphere 30.9
1938 Female, age 85, left hemisphere 29.6
2613 Female, age 94, left hemisphere 27.6
2686 Male, age 75, right hemisphere 25.4
Hippocampus, CA1
nTPM: 28.3
2749 Male, age 80, left hemisphere 30.5
1873 Female, age 85, both hemispheres 28.7
2045 Male, age 76, both hemispheres 28.2
2527 Male, age 74, both hemispheres 27.8
2082 Female, age 91, right hemisphere 26.1
Hippocampus, CA2
nTPM: 29.0
2249 Male, age 74, both hemispheres 31.1
1940 Female, age 85, left hemisphere 30.2
1892 Male, age 76, both hemispheres 29.7
2437 Female, age 94, left hemisphere 28.7
1963 Male, age 80, left hemisphere 28.6
2113 Female, age 91, right hemisphere 25.8
Hippocampus, CA3
nTPM: 29.7
2620 Female, age 94, left hemisphere 38.2
1891 Female, age 85, both hemispheres 30.2
1867 Male, age 76, both hemispheres 29.7
2436 Male, age 74, both hemispheres 29.5
2137 Male, age 80, left hemisphere 26.4
2861 Female, age 67, both hemispheres 24.1
Parahippocampal cortex
nTPM: 27.3
2532 Female, age 72, left hemisphere 31.6
1990 Female, age 91, right hemisphere 30.2
1850 Male, age 80, both hemispheres 29.4
2245 Female, age 91, both hemispheres 28.1
1933 Female, age 85, both hemispheres 27.4
2018 Male, age 76, both hemispheres 27.4
2692 Male, age 74, both hemispheres 26.4
2693 Female, age 94, both hemispheres 26.2
2250 Female, age 67, right hemisphere 25.7
2622 Female, age 67, right hemisphere 20.5
Perirhinal gyrus
nTPM: 28.2
1794 Male, age 80, right hemisphere 30.1
2521 Female, age 94, right hemisphere 29.7
2848 Male, age 76, right hemisphere 28.4
1841 Female, age 85, right hemisphere 27.2
1847 Female, age 91, left hemisphere 25.4
Subiculum
nTPM: 29.9
1901 Male, age 80, both hemispheres 33.7
2619 Male, age 74, both hemispheres 31.7
1977 Female, age 85, both hemispheres 31.4
2438 Female, age 94, left hemisphere 29.5
2042 Male, age 76, both hemispheres 27.6
2729 Female, age 91, right hemisphere 25.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 60.5
Min nTPM: 14.0
Std nTPM: 8.4
Median nTPM: 29.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 60.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 57.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 53.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 51.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 50.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 50.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 48.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 46.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 46.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 45.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 45.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.3
FF:10169-103B7 60 years, female 102.5
FF:10153-102I9 76 years, female 98.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.7
Samples: 4

Max nTPM: 43.3
Min nTPM: 24.1
Sample A Female 43.3
Sample B Female 35.1
Sample C Male 32.1
Sample D Male 24.1
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 31.1
Min nTPM: 23.2
Sample A Female 31.1
Sample B Female 23.6
Sample C Male 23.2
Sample D Male 23.4
Subiculum
nTPM: 25.9
Samples: 4

Max nTPM: 32.0
Min nTPM: 23.2
Sample A Female 32.0
Sample B Female 23.4
Sample C Male 25.0
Sample D Male 23.2
Ventral hippocampus
nTPM: 32.6
Samples: 4

Max nTPM: 39.3
Min nTPM: 20.5
Sample A Female 33.3
Sample B Female 20.5
Sample C Male 39.3
Sample D Male 37.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.2
Samples: 4

Max nTPM: 54.8
Min nTPM: 38.7
Sample A Male 42.1
Sample B Male 38.7
Sample C Female 41.1
Sample D Female 54.8
Hippocampal formation
nTPM: 44.6
Samples: 4

Max nTPM: 47.1
Min nTPM: 39.3
Sample A Male 39.3
Sample B Male 45.5
Sample C Female 46.4
Sample D Female 47.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
1810 Antisense, RP_040604_01_B08, Mouse strain C57BL/6J (56 days, male) 0.9
1811 Antisense, RP_040604_01_B08, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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