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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:10.8 nTPM
FANTOM5:42.7 Scaled Tags Per Million
Pig:52.6 nTPM
Mouse:77.4 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011618Antibody CAB070164
Glial cells Not detectedNot detected
Neuronal cells HighLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
1898 Male, age 80, left hemisphere 16.0
1855 Male, age 76, left hemisphere 11.1
2529 Female, age 94, left hemisphere 10.8
1911 Female, age 85, right hemisphere 10.4
2621 Female, age 67, right hemisphere 10.1
2148 Female, age 91, left hemisphere 9.8
Dentate gyrus
nTPM: 11.4
2010 Male, age 76, both hemispheres 14.3
1927 Female, age 91, both hemispheres 13.1
2528 Male, age 74, both hemispheres 12.0
2246 Female, age 85, both hemispheres 10.9
2530 Female, age 94, left hemisphere 9.2
2531 Female, age 67, both hemispheres 8.9
Entorhinal gyrus
nTPM: 10.6
1938 Female, age 85, left hemisphere 12.9
2117 Female, age 91, right hemisphere 12.2
2764 Male, age 80, right hemisphere 11.9
1787 Male, age 76, left hemisphere 10.1
2613 Female, age 94, left hemisphere 8.2
2686 Male, age 75, right hemisphere 8.1
Hippocampus, CA1
nTPM: 14.3
2749 Male, age 80, left hemisphere 24.6
1873 Female, age 85, both hemispheres 13.8
2045 Male, age 76, both hemispheres 11.8
2527 Male, age 74, both hemispheres 11.7
2082 Female, age 91, right hemisphere 9.6
Hippocampus, CA2
nTPM: 11.8
1963 Male, age 80, left hemisphere 15.8
1892 Male, age 76, both hemispheres 15.4
2249 Male, age 74, both hemispheres 11.5
2113 Female, age 91, right hemisphere 10.4
2437 Female, age 94, left hemisphere 8.9
1940 Female, age 85, left hemisphere 8.7
Hippocampus, CA3
nTPM: 12.4
2137 Male, age 80, left hemisphere 20.4
1867 Male, age 76, both hemispheres 14.7
1891 Female, age 85, both hemispheres 11.8
2436 Male, age 74, both hemispheres 10.6
2620 Female, age 94, left hemisphere 8.8
2861 Female, age 67, both hemispheres 8.1
Parahippocampal cortex
nTPM: 10.8
1850 Male, age 80, both hemispheres 15.4
1933 Female, age 85, both hemispheres 12.2
1990 Female, age 91, right hemisphere 11.8
2245 Female, age 91, both hemispheres 10.6
2250 Female, age 67, right hemisphere 10.6
2018 Male, age 76, both hemispheres 10.3
2693 Female, age 94, both hemispheres 10.0
2532 Female, age 72, left hemisphere 9.9
2692 Male, age 74, both hemispheres 9.9
2622 Female, age 67, right hemisphere 7.0
Perirhinal gyrus
nTPM: 13.2
1794 Male, age 80, right hemisphere 14.8
1847 Female, age 91, left hemisphere 14.2
2521 Female, age 94, right hemisphere 13.1
1841 Female, age 85, right hemisphere 12.9
2848 Male, age 76, right hemisphere 10.9
Subiculum
nTPM: 11.3
1901 Male, age 80, both hemispheres 13.9
1977 Female, age 85, both hemispheres 12.4
2438 Female, age 94, left hemisphere 11.0
2042 Male, age 76, both hemispheres 10.8
2729 Female, age 91, right hemisphere 10.0
2619 Male, age 74, both hemispheres 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 16.3
Min nTPM: 7.6
Std nTPM: 1.5
Median nTPM: 10.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 16.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 16.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 15.7
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 14.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 14.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 13.9
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 13.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 13.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 13.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 13.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 13.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.7
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.6
Samples: 4

Max nTPM: 69.0
Min nTPM: 37.7
Sample A Female 69.0
Sample B Female 58.6
Sample C Male 45.2
Sample D Male 37.7
Entorhinal cortex
nTPM: 45.9
Samples: 4

Max nTPM: 56.6
Min nTPM: 33.8
Sample A Female 56.6
Sample B Female 55.6
Sample C Male 37.7
Sample D Male 33.8
Subiculum
nTPM: 48.1
Samples: 4

Max nTPM: 62.8
Min nTPM: 38.0
Sample A Female 62.8
Sample B Female 52.5
Sample C Male 39.1
Sample D Male 38.0
Ventral hippocampus
nTPM: 47.5
Samples: 4

Max nTPM: 62.0
Min nTPM: 39.5
Sample A Female 62.0
Sample B Female 47.6
Sample C Male 39.5
Sample D Male 40.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 77.4
Samples: 4

Max nTPM: 101.7
Min nTPM: 66.5
Sample A Male 71.6
Sample B Male 66.5
Sample C Female 69.7
Sample D Female 101.7
Hippocampal formation
nTPM: 68.0
Samples: 4

Max nTPM: 87.3
Min nTPM: 53.1
Sample A Male 56.8
Sample B Male 74.9
Sample C Female 87.3
Sample D Female 53.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
70194678 Antisense, RP_050517_01_H07, Mouse strain C57BL/6J (56 days, male) 5.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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