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NRN1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:98.9 nTPM
HPA:98.9 nTPM
GTEx:136.0 nTPM
FANTOM5:108.2 Scaled Tags Per Million
Pig:123.8 nTPM
Mouse:320.7 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 98.9
Sample id Sample description nTPM
Hippocampus
nTPM: 71.8
2148 Female, age 91, left hemisphere 88.4
1898 Male, age 80, left hemisphere 88.2
1855 Male, age 76, left hemisphere 85.4
2621 Female, age 67, right hemisphere 65.5
2529 Female, age 94, left hemisphere 52.0
1911 Female, age 85, right hemisphere 51.7
Dentate gyrus
nTPM: 82.8
1927 Female, age 91, both hemispheres 122.0
2531 Female, age 67, both hemispheres 95.9
2010 Male, age 76, both hemispheres 83.8
2530 Female, age 94, left hemisphere 72.9
2528 Male, age 74, both hemispheres 62.3
2246 Female, age 85, both hemispheres 60.0
Entorhinal gyrus
nTPM: 38.9
2764 Male, age 80, right hemisphere 48.6
2613 Female, age 94, left hemisphere 45.6
1938 Female, age 85, left hemisphere 39.5
1787 Male, age 76, left hemisphere 34.9
2686 Male, age 75, right hemisphere 34.8
2117 Female, age 91, right hemisphere 30.1
Hippocampus, CA1
nTPM: 98.9
2749 Male, age 80, left hemisphere 143.2
2045 Male, age 76, both hemispheres 137.2
1873 Female, age 85, both hemispheres 86.3
2527 Male, age 74, both hemispheres 76.9
2082 Female, age 91, right hemisphere 50.9
Hippocampus, CA2
nTPM: 63.7
1892 Male, age 76, both hemispheres 93.6
1963 Male, age 80, left hemisphere 78.4
2249 Male, age 74, both hemispheres 63.0
2437 Female, age 94, left hemisphere 54.3
2113 Female, age 91, right hemisphere 53.6
1940 Female, age 85, left hemisphere 39.2
Hippocampus, CA3
nTPM: 85.2
2137 Male, age 80, left hemisphere 115.2
1867 Male, age 76, both hemispheres 111.4
2861 Female, age 67, both hemispheres 89.4
2620 Female, age 94, left hemisphere 87.2
1891 Female, age 85, both hemispheres 55.8
2436 Male, age 74, both hemispheres 52.2
Parahippocampal cortex
nTPM: 50.8
2018 Male, age 76, both hemispheres 70.0
2245 Female, age 91, both hemispheres 65.8
1850 Male, age 80, both hemispheres 58.3
2532 Female, age 72, left hemisphere 56.5
2250 Female, age 67, right hemisphere 50.0
1933 Female, age 85, both hemispheres 47.7
2693 Female, age 94, both hemispheres 46.3
1990 Female, age 91, right hemisphere 43.3
2622 Female, age 67, right hemisphere 35.2
2692 Male, age 74, both hemispheres 35.1
Perirhinal gyrus
nTPM: 55.3
1847 Female, age 91, left hemisphere 66.8
2521 Female, age 94, right hemisphere 63.0
1841 Female, age 85, right hemisphere 56.7
1794 Male, age 80, right hemisphere 56.4
2848 Male, age 76, right hemisphere 33.4
Subiculum
nTPM: 48.3
2729 Female, age 91, right hemisphere 63.5
1901 Male, age 80, both hemispheres 61.2
2438 Female, age 94, left hemisphere 45.2
2042 Male, age 76, both hemispheres 43.8
1977 Female, age 85, both hemispheres 40.9
2619 Male, age 74, both hemispheres 35.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 136.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 136.0
Samples: 197

Max nTPM: 362.5
Min nTPM: 28.5
Std nTPM: 63.4
Median nTPM: 128.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 362.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 348.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 293.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 287.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 286.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 284.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 271.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 268.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 259.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 257.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 254.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.2
FF:10169-103B7 60 years, female 151.7
FF:10153-102I9 76 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 123.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 113.3
Samples: 4

Max nTPM: 137.7
Min nTPM: 73.0
Sample A Female 137.7
Sample B Female 122.8
Sample C Male 73.0
Sample D Male 119.8
Entorhinal cortex
nTPM: 123.8
Samples: 4

Max nTPM: 135.4
Min nTPM: 112.3
Sample A Female 128.5
Sample B Female 135.4
Sample C Male 119.0
Sample D Male 112.3
Subiculum
nTPM: 76.7
Samples: 4

Max nTPM: 91.8
Min nTPM: 64.4
Sample A Female 91.8
Sample B Female 64.4
Sample C Male 72.9
Sample D Male 77.7
Ventral hippocampus
nTPM: 95.0
Samples: 4

Max nTPM: 111.3
Min nTPM: 68.3
Sample A Female 104.6
Sample B Female 68.3
Sample C Male 111.3
Sample D Male 95.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 320.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 234.7
Samples: 4

Max nTPM: 272.9
Min nTPM: 214.9
Sample A Male 223.2
Sample B Male 272.9
Sample C Female 214.9
Sample D Female 227.6
Hippocampal formation
nTPM: 320.7
Samples: 4

Max nTPM: 371.3
Min nTPM: 283.4
Sample A Male 301.2
Sample B Male 327.0
Sample C Female 371.3
Sample D Female 283.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
75147760 Antisense, RP_051206_02_H12, Mouse strain C57BL/6J (56 days, male) 17.2
74427071 Antisense, RP_051206_02_H12, Mouse strain C57BL/6J (56 days, male) 13.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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