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SNRPD2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:312.2 nTPM
HPA:312.2 nTPM
GTEx:201.7 nTPM
FANTOM5:100.0 Scaled Tags Per Million
Pig:135.3 nTPM
Mouse:62.7 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041437
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 312.2
Sample id Sample description nTPM
Hippocampus
nTPM: 305.6
1898 Male, age 80, left hemisphere 316.5
2621 Female, age 67, right hemisphere 307.8
1855 Male, age 76, left hemisphere 306.1
2529 Female, age 94, left hemisphere 305.3
1911 Female, age 85, right hemisphere 301.1
2148 Female, age 91, left hemisphere 296.9
Dentate gyrus
nTPM: 305.7
2530 Female, age 94, left hemisphere 319.4
2010 Male, age 76, both hemispheres 310.4
1927 Female, age 91, both hemispheres 308.3
2246 Female, age 85, both hemispheres 304.9
2531 Female, age 67, both hemispheres 299.1
2528 Male, age 74, both hemispheres 291.9
Entorhinal gyrus
nTPM: 304.6
1938 Female, age 85, left hemisphere 310.0
1787 Male, age 76, left hemisphere 309.1
2764 Male, age 80, right hemisphere 306.8
2686 Male, age 75, right hemisphere 303.6
2613 Female, age 94, left hemisphere 302.1
2117 Female, age 91, right hemisphere 296.2
Hippocampus, CA1
nTPM: 308.3
2749 Male, age 80, left hemisphere 321.4
2045 Male, age 76, both hemispheres 310.5
1873 Female, age 85, both hemispheres 308.0
2527 Male, age 74, both hemispheres 302.1
2082 Female, age 91, right hemisphere 299.7
Hippocampus, CA2
nTPM: 305.6
1892 Male, age 76, both hemispheres 322.6
1963 Male, age 80, left hemisphere 309.4
2437 Female, age 94, left hemisphere 305.7
2249 Male, age 74, both hemispheres 301.4
1940 Female, age 85, left hemisphere 300.7
2113 Female, age 91, right hemisphere 294.0
Hippocampus, CA3
nTPM: 304.8
1867 Male, age 76, both hemispheres 312.8
2137 Male, age 80, left hemisphere 307.2
2436 Male, age 74, both hemispheres 304.1
1891 Female, age 85, both hemispheres 302.3
2620 Female, age 94, left hemisphere 301.6
2861 Female, age 67, both hemispheres 301.1
Parahippocampal cortex
nTPM: 303.4
1850 Male, age 80, both hemispheres 312.6
2018 Male, age 76, both hemispheres 309.7
1933 Female, age 85, both hemispheres 309.6
2245 Female, age 91, both hemispheres 307.8
2250 Female, age 67, right hemisphere 306.7
2532 Female, age 72, left hemisphere 301.5
1990 Female, age 91, right hemisphere 300.1
2692 Male, age 74, both hemispheres 296.1
2622 Female, age 67, right hemisphere 295.9
2693 Female, age 94, both hemispheres 294.5
Perirhinal gyrus
nTPM: 312.2
1847 Female, age 91, left hemisphere 327.1
1794 Male, age 80, right hemisphere 318.5
1841 Female, age 85, right hemisphere 312.9
2848 Male, age 76, right hemisphere 302.0
2521 Female, age 94, right hemisphere 300.8
Subiculum
nTPM: 302.1
1901 Male, age 80, both hemispheres 307.6
1977 Female, age 85, both hemispheres 307.3
2042 Male, age 76, both hemispheres 305.6
2619 Male, age 74, both hemispheres 301.6
2438 Female, age 94, left hemisphere 299.6
2729 Female, age 91, right hemisphere 291.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 201.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 201.7
Samples: 197

Max nTPM: 543.1
Min nTPM: 100.1
Std nTPM: 60.1
Median nTPM: 191.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 543.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 433.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 401.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 354.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 350.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 347.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 329.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 327.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 324.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 315.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 303.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.0
FF:10169-103B7 60 years, female 113.0
FF:10153-102I9 76 years, female 87.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 135.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 135.3
Samples: 4

Max nTPM: 204.4
Min nTPM: 91.1
Sample A Female 204.4
Sample B Female 113.2
Sample C Male 132.4
Sample D Male 91.1
Entorhinal cortex
nTPM: 89.9
Samples: 4

Max nTPM: 104.9
Min nTPM: 61.8
Sample A Female 88.4
Sample B Female 104.9
Sample C Male 104.6
Sample D Male 61.8
Subiculum
nTPM: 91.5
Samples: 4

Max nTPM: 130.7
Min nTPM: 72.7
Sample A Female 130.7
Sample B Female 85.6
Sample C Male 76.8
Sample D Male 72.7
Ventral hippocampus
nTPM: 111.4
Samples: 4

Max nTPM: 133.3
Min nTPM: 81.6
Sample A Female 114.4
Sample B Female 81.6
Sample C Male 133.3
Sample D Male 116.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.3
Samples: 4

Max nTPM: 66.8
Min nTPM: 54.3
Sample A Male 54.3
Sample B Male 59.4
Sample C Female 66.8
Sample D Female 56.5
Hippocampal formation
nTPM: 62.7
Samples: 4

Max nTPM: 68.7
Min nTPM: 56.2
Sample A Male 68.7
Sample B Male 56.2
Sample C Female 60.4
Sample D Female 65.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
68744002 Antisense, RP_050203_02_A05, Mouse strain C57BL/6J (56 days, male) 3.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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