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GPCPD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.1 nTPM
HPA:16.1 nTPM
GTEx:16.7 nTPM
FANTOM5:29.5 Scaled Tags Per Million
Pig:29.8 nTPM
Mouse:56.1 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.4
2529 Female, age 94, left hemisphere 16.1
2148 Female, age 91, left hemisphere 16.0
2621 Female, age 67, right hemisphere 15.3
1855 Male, age 76, left hemisphere 15.2
1898 Male, age 80, left hemisphere 15.2
1911 Female, age 85, right hemisphere 14.3
Dentate gyrus
nTPM: 15.8
2531 Female, age 67, both hemispheres 17.4
2530 Female, age 94, left hemisphere 16.9
2010 Male, age 76, both hemispheres 15.5
1927 Female, age 91, both hemispheres 15.4
2528 Male, age 74, both hemispheres 15.1
2246 Female, age 85, both hemispheres 14.3
Entorhinal gyrus
nTPM: 15.3
2686 Male, age 75, right hemisphere 17.5
2117 Female, age 91, right hemisphere 15.2
2764 Male, age 80, right hemisphere 15.1
2613 Female, age 94, left hemisphere 14.9
1787 Male, age 76, left hemisphere 14.7
1938 Female, age 85, left hemisphere 14.1
Hippocampus, CA1
nTPM: 15.4
2045 Male, age 76, both hemispheres 16.8
2749 Male, age 80, left hemisphere 15.4
2527 Male, age 74, both hemispheres 15.2
2082 Female, age 91, right hemisphere 14.9
1873 Female, age 85, both hemispheres 14.7
Hippocampus, CA2
nTPM: 14.8
2437 Female, age 94, left hemisphere 16.1
1892 Male, age 76, both hemispheres 15.1
2113 Female, age 91, right hemisphere 15.0
1963 Male, age 80, left hemisphere 14.5
2249 Male, age 74, both hemispheres 14.1
1940 Female, age 85, left hemisphere 13.8
Hippocampus, CA3
nTPM: 16.1
2861 Female, age 67, both hemispheres 19.6
1867 Male, age 76, both hemispheres 16.5
2137 Male, age 80, left hemisphere 16.2
2620 Female, age 94, left hemisphere 16.2
1891 Female, age 85, both hemispheres 14.0
2436 Male, age 74, both hemispheres 14.0
Parahippocampal cortex
nTPM: 15.6
2018 Male, age 76, both hemispheres 17.0
2693 Female, age 94, both hemispheres 16.9
1850 Male, age 80, both hemispheres 16.2
2622 Female, age 67, right hemisphere 16.1
2532 Female, age 72, left hemisphere 15.7
2692 Male, age 74, both hemispheres 15.6
2245 Female, age 91, both hemispheres 15.4
1990 Female, age 91, right hemisphere 15.2
2250 Female, age 67, right hemisphere 14.3
1933 Female, age 85, both hemispheres 13.9
Perirhinal gyrus
nTPM: 15.2
1794 Male, age 80, right hemisphere 15.9
1841 Female, age 85, right hemisphere 15.5
2521 Female, age 94, right hemisphere 15.3
1847 Female, age 91, left hemisphere 15.1
2848 Male, age 76, right hemisphere 14.1
Subiculum
nTPM: 15.2
2042 Male, age 76, both hemispheres 16.2
2729 Female, age 91, right hemisphere 16.2
2619 Male, age 74, both hemispheres 15.4
2438 Female, age 94, left hemisphere 15.0
1901 Male, age 80, both hemispheres 14.5
1977 Female, age 85, both hemispheres 13.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 52.4
Min nTPM: 5.6
Std nTPM: 8.9
Median nTPM: 14.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 52.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 50.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 49.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 47.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 47.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 42.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 41.0
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 37.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 36.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 34.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 34.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.5
FF:10169-103B7 60 years, female 37.6
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 25.6
Min nTPM: 14.1
Sample A Female 14.1
Sample B Female 18.9
Sample C Male 24.2
Sample D Male 25.6
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 31.9
Min nTPM: 26.3
Sample A Female 26.3
Sample B Female 31.9
Sample C Male 30.4
Sample D Male 30.6
Subiculum
nTPM: 23.8
Samples: 4

Max nTPM: 29.9
Min nTPM: 17.6
Sample A Female 17.6
Sample B Female 23.3
Sample C Male 24.2
Sample D Male 29.9
Ventral hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 24.3
Min nTPM: 18.6
Sample A Female 20.1
Sample B Female 24.3
Sample C Male 18.6
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.1
Samples: 4

Max nTPM: 61.3
Min nTPM: 50.3
Sample A Male 57.1
Sample B Male 61.3
Sample C Female 55.6
Sample D Female 50.3
Hippocampal formation
nTPM: 49.5
Samples: 4

Max nTPM: 58.0
Min nTPM: 44.8
Sample A Male 58.0
Sample B Male 46.7
Sample C Female 44.8
Sample D Female 48.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
71489800 Antisense, RP_050614_03_G09, Mouse strain C57BL/6J (56 days, male) 11.0

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