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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:89.6 nTPM
HPA:89.6 nTPM
GTEx:117.6 nTPM
FANTOM5:44.1 Scaled Tags Per Million
Mouse:47.0 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011626
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.6
Sample id Sample description nTPM
Hippocampus
nTPM: 88.2
2529 Female, age 94, left hemisphere 94.6
2621 Female, age 67, right hemisphere 88.3
1898 Male, age 80, left hemisphere 88.2
1911 Female, age 85, right hemisphere 87.0
2148 Female, age 91, left hemisphere 86.8
1855 Male, age 76, left hemisphere 84.4
Dentate gyrus
nTPM: 88.8
2530 Female, age 94, left hemisphere 115.0
2010 Male, age 76, both hemispheres 90.3
2531 Female, age 67, both hemispheres 89.6
2528 Male, age 74, both hemispheres 82.4
2246 Female, age 85, both hemispheres 79.4
1927 Female, age 91, both hemispheres 76.4
Entorhinal gyrus
nTPM: 89.6
2117 Female, age 91, right hemisphere 105.9
2686 Male, age 75, right hemisphere 99.4
2764 Male, age 80, right hemisphere 88.8
2613 Female, age 94, left hemisphere 82.0
1787 Male, age 76, left hemisphere 81.9
1938 Female, age 85, left hemisphere 79.6
Hippocampus, CA1
nTPM: 78.7
2527 Male, age 74, both hemispheres 81.3
1873 Female, age 85, both hemispheres 80.8
2082 Female, age 91, right hemisphere 80.2
2749 Male, age 80, left hemisphere 78.5
2045 Male, age 76, both hemispheres 72.7
Hippocampus, CA2
nTPM: 85.9
1963 Male, age 80, left hemisphere 102.8
2437 Female, age 94, left hemisphere 87.9
2113 Female, age 91, right hemisphere 83.9
2249 Male, age 74, both hemispheres 82.4
1940 Female, age 85, left hemisphere 81.0
1892 Male, age 76, both hemispheres 77.2
Hippocampus, CA3
nTPM: 79.1
2861 Female, age 67, both hemispheres 89.9
1891 Female, age 85, both hemispheres 85.1
1867 Male, age 76, both hemispheres 81.3
2137 Male, age 80, left hemisphere 74.6
2620 Female, age 94, left hemisphere 73.0
2436 Male, age 74, both hemispheres 70.9
Parahippocampal cortex
nTPM: 79.9
2622 Female, age 67, right hemisphere 86.6
2532 Female, age 72, left hemisphere 84.6
2692 Male, age 74, both hemispheres 83.6
2245 Female, age 91, both hemispheres 83.4
1990 Female, age 91, right hemisphere 83.0
2018 Male, age 76, both hemispheres 80.1
1933 Female, age 85, both hemispheres 77.8
2250 Female, age 67, right hemisphere 76.6
1850 Male, age 80, both hemispheres 74.0
2693 Female, age 94, both hemispheres 69.2
Perirhinal gyrus
nTPM: 72.8
1794 Male, age 80, right hemisphere 76.8
1847 Female, age 91, left hemisphere 73.3
2848 Male, age 76, right hemisphere 71.6
1841 Female, age 85, right hemisphere 71.3
2521 Female, age 94, right hemisphere 70.8
Subiculum
nTPM: 87.7
2042 Male, age 76, both hemispheres 93.3
2729 Female, age 91, right hemisphere 89.6
1901 Male, age 80, both hemispheres 89.4
1977 Female, age 85, both hemispheres 88.1
2438 Female, age 94, left hemisphere 83.8
2619 Male, age 74, both hemispheres 82.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 117.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 117.6
Samples: 197

Max nTPM: 450.4
Min nTPM: 28.4
Std nTPM: 58.3
Median nTPM: 104.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 450.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 308.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 297.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 287.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 282.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 269.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 267.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 263.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 256.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 230.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 226.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.1
FF:10153-102I9 76 years, female 58.9
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.0
Samples: 4

Max nTPM: 53.0
Min nTPM: 42.7
Sample A Male 53.0
Sample B Male 48.5
Sample C Female 43.8
Sample D Female 42.7
Hippocampal formation
nTPM: 46.9
Samples: 4

Max nTPM: 49.4
Min nTPM: 44.5
Sample A Male 46.3
Sample B Male 44.5
Sample C Female 49.4
Sample D Female 47.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
76081088 Antisense, RP_060608_04_A09, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.