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TBC1D20
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.4 nTPM
HPA:20.4 nTPM
GTEx:17.5 nTPM
FANTOM5:41.6 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:36.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043613
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.4
Sample id Sample description nTPM
Hippocampus
nTPM: 20.1
1855 Male, age 76, left hemisphere 21.2
1898 Male, age 80, left hemisphere 20.7
1911 Female, age 85, right hemisphere 20.2
2529 Female, age 94, left hemisphere 19.7
2621 Female, age 67, right hemisphere 19.6
2148 Female, age 91, left hemisphere 19.4
Dentate gyrus
nTPM: 19.7
2530 Female, age 94, left hemisphere 21.9
2528 Male, age 74, both hemispheres 20.1
2246 Female, age 85, both hemispheres 19.4
2010 Male, age 76, both hemispheres 19.3
1927 Female, age 91, both hemispheres 19.1
2531 Female, age 67, both hemispheres 18.4
Entorhinal gyrus
nTPM: 19.6
2117 Female, age 91, right hemisphere 21.5
2764 Male, age 80, right hemisphere 20.4
1938 Female, age 85, left hemisphere 20.0
1787 Male, age 76, left hemisphere 19.2
2686 Male, age 75, right hemisphere 18.5
2613 Female, age 94, left hemisphere 18.2
Hippocampus, CA1
nTPM: 19.5
2749 Male, age 80, left hemisphere 20.9
2527 Male, age 74, both hemispheres 19.7
1873 Female, age 85, both hemispheres 19.4
2082 Female, age 91, right hemisphere 18.8
2045 Male, age 76, both hemispheres 18.6
Hippocampus, CA2
nTPM: 19.7
1963 Male, age 80, left hemisphere 22.2
1940 Female, age 85, left hemisphere 19.5
1892 Male, age 76, both hemispheres 19.4
2113 Female, age 91, right hemisphere 19.4
2437 Female, age 94, left hemisphere 19.2
2249 Male, age 74, both hemispheres 18.8
Hippocampus, CA3
nTPM: 18.8
1891 Female, age 85, both hemispheres 20.4
1867 Male, age 76, both hemispheres 19.1
2436 Male, age 74, both hemispheres 18.8
2861 Female, age 67, both hemispheres 18.7
2137 Male, age 80, left hemisphere 18.2
2620 Female, age 94, left hemisphere 17.8
Parahippocampal cortex
nTPM: 19.1
2692 Male, age 74, both hemispheres 20.7
1850 Male, age 80, both hemispheres 20.3
2245 Female, age 91, both hemispheres 19.7
2250 Female, age 67, right hemisphere 19.5
1990 Female, age 91, right hemisphere 19.3
2693 Female, age 94, both hemispheres 18.6
1933 Female, age 85, both hemispheres 18.5
2622 Female, age 67, right hemisphere 18.5
2532 Female, age 72, left hemisphere 18.4
2018 Male, age 76, both hemispheres 17.3
Perirhinal gyrus
nTPM: 19.4
1841 Female, age 85, right hemisphere 20.3
1794 Male, age 80, right hemisphere 19.8
2521 Female, age 94, right hemisphere 19.4
2848 Male, age 76, right hemisphere 19.1
1847 Female, age 91, left hemisphere 18.3
Subiculum
nTPM: 20.4
2438 Female, age 94, left hemisphere 21.5
1901 Male, age 80, both hemispheres 21.3
2619 Male, age 74, both hemispheres 20.4
1977 Female, age 85, both hemispheres 20.2
2042 Male, age 76, both hemispheres 20.0
2729 Female, age 91, right hemisphere 19.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.5
Samples: 197

Max nTPM: 24.1
Min nTPM: 9.8
Std nTPM: 2.0
Median nTPM: 17.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 23.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 22.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 22.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 21.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 21.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 20.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 20.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 20.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 20.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.6
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 41.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 14.3
Min nTPM: 9.5
Sample A Female 14.3
Sample B Female 13.4
Sample C Male 12.7
Sample D Male 9.5
Entorhinal cortex
nTPM: 11.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.4
Sample A Female 12.6
Sample B Female 11.4
Sample C Male 12.9
Sample D Male 10.4
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.9
Sample A Female 13.5
Sample B Female 11.1
Sample C Male 10.9
Sample D Male 11.6
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.2
Min nTPM: 9.7
Sample A Female 12.8
Sample B Female 9.7
Sample C Male 15.2
Sample D Male 13.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 38.0
Min nTPM: 35.0
Sample A Male 36.4
Sample B Male 35.6
Sample C Female 35.0
Sample D Female 38.0
Hippocampal formation
nTPM: 35.6
Samples: 4

Max nTPM: 36.7
Min nTPM: 33.9
Sample A Male 36.7
Sample B Male 36.4
Sample C Female 35.5
Sample D Female 33.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68191162 Antisense, RP_041122_02_H05, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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