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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:45.3 nTPM
HPA:45.3 nTPM
GTEx:73.6 nTPM
FANTOM5:60.2 Scaled Tags Per Million
Pig:6.6 nTPM
Mouse:17.5 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025915
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.3
Sample id Sample description nTPM
Hippocampus
nTPM: 45.3
2529 Female, age 94, left hemisphere 54.5
1855 Male, age 76, left hemisphere 46.7
1911 Female, age 85, right hemisphere 45.5
2621 Female, age 67, right hemisphere 43.8
1898 Male, age 80, left hemisphere 42.6
2148 Female, age 91, left hemisphere 39.1
Dentate gyrus
nTPM: 42.6
2530 Female, age 94, left hemisphere 52.4
2528 Male, age 74, both hemispheres 45.1
2531 Female, age 67, both hemispheres 44.4
2246 Female, age 85, both hemispheres 39.2
2010 Male, age 76, both hemispheres 38.0
1927 Female, age 91, both hemispheres 36.5
Entorhinal gyrus
nTPM: 39.6
2117 Female, age 91, right hemisphere 48.5
1787 Male, age 76, left hemisphere 41.0
2686 Male, age 75, right hemisphere 40.9
2764 Male, age 80, right hemisphere 38.3
2613 Female, age 94, left hemisphere 35.0
1938 Female, age 85, left hemisphere 34.1
Hippocampus, CA1
nTPM: 37.3
2527 Male, age 74, both hemispheres 45.1
1873 Female, age 85, both hemispheres 40.1
2082 Female, age 91, right hemisphere 35.8
2749 Male, age 80, left hemisphere 33.3
2045 Male, age 76, both hemispheres 32.3
Hippocampus, CA2
nTPM: 42.8
1963 Male, age 80, left hemisphere 49.3
2249 Male, age 74, both hemispheres 47.3
2437 Female, age 94, left hemisphere 46.2
1940 Female, age 85, left hemisphere 41.1
2113 Female, age 91, right hemisphere 40.5
1892 Male, age 76, both hemispheres 32.5
Hippocampus, CA3
nTPM: 41.0
2861 Female, age 67, both hemispheres 55.0
1891 Female, age 85, both hemispheres 41.5
2436 Male, age 74, both hemispheres 39.5
2620 Female, age 94, left hemisphere 39.3
2137 Male, age 80, left hemisphere 36.8
1867 Male, age 76, both hemispheres 33.7
Parahippocampal cortex
nTPM: 35.8
1990 Female, age 91, right hemisphere 39.5
2622 Female, age 67, right hemisphere 39.3
2532 Female, age 72, left hemisphere 37.5
2245 Female, age 91, both hemispheres 36.9
2692 Male, age 74, both hemispheres 36.4
2250 Female, age 67, right hemisphere 36.2
2693 Female, age 94, both hemispheres 34.0
1850 Male, age 80, both hemispheres 33.8
1933 Female, age 85, both hemispheres 33.2
2018 Male, age 76, both hemispheres 31.4
Perirhinal gyrus
nTPM: 36.4
2521 Female, age 94, right hemisphere 41.2
2848 Male, age 76, right hemisphere 37.9
1841 Female, age 85, right hemisphere 35.7
1794 Male, age 80, right hemisphere 35.1
1847 Female, age 91, left hemisphere 32.3
Subiculum
nTPM: 40.7
2729 Female, age 91, right hemisphere 43.6
2619 Male, age 74, both hemispheres 43.2
2042 Male, age 76, both hemispheres 40.3
2438 Female, age 94, left hemisphere 40.3
1977 Female, age 85, both hemispheres 39.8
1901 Male, age 80, both hemispheres 36.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.6
Samples: 197

Max nTPM: 295.7
Min nTPM: 9.1
Std nTPM: 45.4
Median nTPM: 63.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 295.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 266.4
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 200.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 187.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 186.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 182.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 179.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 173.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 162.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 156.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 155.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.2
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 40.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 9.3
Min nTPM: 4.4
Sample A Female 9.3
Sample B Female 4.8
Sample C Male 7.9
Sample D Male 4.4
Entorhinal cortex
nTPM: 5.7
Samples: 4

Max nTPM: 7.6
Min nTPM: 3.4
Sample A Female 5.4
Sample B Female 6.5
Sample C Male 7.6
Sample D Male 3.4
Subiculum
nTPM: 4.8
Samples: 4

Max nTPM: 6.4
Min nTPM: 2.9
Sample A Female 5.8
Sample B Female 2.9
Sample C Male 4.0
Sample D Male 6.4
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 7.6
Min nTPM: 4.2
Sample A Female 7.2
Sample B Female 4.2
Sample C Male 7.6
Sample D Male 5.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.2
Sample A Male 17.0
Sample B Male 19.1
Sample C Female 19.7
Sample D Female 14.2
Hippocampal formation
nTPM: 15.4
Samples: 4

Max nTPM: 19.5
Min nTPM: 11.6
Sample A Male 11.6
Sample B Male 13.2
Sample C Female 17.4
Sample D Female 19.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71608229 Antisense, RP_050927_01_D01, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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