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KDM5C
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.6 nTPM
HPA:19.6 nTPM
GTEx:15.9 nTPM
FANTOM5:46.5 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:19.3 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 17.4
2148 Female, age 91, left hemisphere 18.4
2529 Female, age 94, left hemisphere 17.9
1855 Male, age 76, left hemisphere 17.4
2621 Female, age 67, right hemisphere 17.4
1898 Male, age 80, left hemisphere 17.3
1911 Female, age 85, right hemisphere 15.9
Dentate gyrus
nTPM: 17.8
2531 Female, age 67, both hemispheres 19.9
2528 Male, age 74, both hemispheres 18.3
2530 Female, age 94, left hemisphere 17.7
2010 Male, age 76, both hemispheres 17.6
1927 Female, age 91, both hemispheres 17.1
2246 Female, age 85, both hemispheres 16.4
Entorhinal gyrus
nTPM: 19.6
2764 Male, age 80, right hemisphere 22.8
2613 Female, age 94, left hemisphere 20.2
1787 Male, age 76, left hemisphere 19.9
2686 Male, age 75, right hemisphere 19.4
2117 Female, age 91, right hemisphere 18.1
1938 Female, age 85, left hemisphere 17.1
Hippocampus, CA1
nTPM: 18.5
2045 Male, age 76, both hemispheres 20.8
2749 Male, age 80, left hemisphere 19.4
2082 Female, age 91, right hemisphere 18.2
2527 Male, age 74, both hemispheres 17.1
1873 Female, age 85, both hemispheres 17.0
Hippocampus, CA2
nTPM: 17.0
1892 Male, age 76, both hemispheres 17.7
1963 Male, age 80, left hemisphere 17.6
2437 Female, age 94, left hemisphere 17.2
2113 Female, age 91, right hemisphere 17.0
2249 Male, age 74, both hemispheres 16.5
1940 Female, age 85, left hemisphere 15.8
Hippocampus, CA3
nTPM: 19.0
2620 Female, age 94, left hemisphere 23.5
2137 Male, age 80, left hemisphere 19.0
1867 Male, age 76, both hemispheres 18.9
2861 Female, age 67, both hemispheres 18.4
2436 Male, age 74, both hemispheres 18.2
1891 Female, age 85, both hemispheres 16.2
Parahippocampal cortex
nTPM: 18.4
2532 Female, age 72, left hemisphere 20.0
1850 Male, age 80, both hemispheres 19.7
2622 Female, age 67, right hemisphere 19.2
2018 Male, age 76, both hemispheres 19.1
2693 Female, age 94, both hemispheres 18.2
1990 Female, age 91, right hemisphere 18.1
2692 Male, age 74, both hemispheres 17.7
1933 Female, age 85, both hemispheres 17.6
2245 Female, age 91, both hemispheres 17.6
2250 Female, age 67, right hemisphere 16.7
Perirhinal gyrus
nTPM: 18.9
1794 Male, age 80, right hemisphere 21.1
2848 Male, age 76, right hemisphere 19.5
1841 Female, age 85, right hemisphere 18.3
2521 Female, age 94, right hemisphere 18.0
1847 Female, age 91, left hemisphere 17.7
Subiculum
nTPM: 17.2
1901 Male, age 80, both hemispheres 17.8
1977 Female, age 85, both hemispheres 17.7
2042 Male, age 76, both hemispheres 17.6
2619 Male, age 74, both hemispheres 17.6
2729 Female, age 91, right hemisphere 16.8
2438 Female, age 94, left hemisphere 15.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 28.4
Min nTPM: 8.2
Std nTPM: 3.3
Median nTPM: 15.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 28.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 25.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 25.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 25.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 24.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 24.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 24.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 22.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 22.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.5
FF:10153-102I9 76 years, female 60.7
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 15.8
Min nTPM: 11.8
Sample A Female 15.8
Sample B Female 14.6
Sample C Male 13.8
Sample D Male 11.8
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 15.9
Min nTPM: 13.8
Sample A Female 15.9
Sample B Female 14.6
Sample C Male 13.8
Sample D Male 14.1
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 16.7
Min nTPM: 12.1
Sample A Female 16.7
Sample B Female 13.0
Sample C Male 13.7
Sample D Male 12.1
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 18.1
Min nTPM: 11.0
Sample A Female 14.7
Sample B Female 11.0
Sample C Male 18.1
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 23.7
Min nTPM: 15.3
Sample A Male 15.8
Sample B Male 15.3
Sample C Female 19.0
Sample D Female 23.7
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 25.3
Min nTPM: 13.6
Sample A Male 13.6
Sample B Male 16.3
Sample C Female 25.3
Sample D Female 22.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69289255 Antisense, RP_050407_02_H01, Mouse strain C57BL/6J (56 days, male) 4.6

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The Human Protein Atlas

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