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ZBTB1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.6 nTPM
HPA:15.6 nTPM
GTEx:15.2 nTPM
FANTOM5:53.5 Scaled Tags Per Million
Pig:35.6 nTPM
Mouse:2.6 nTPM
Allen mouse:0.6 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 15.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 12.8
2019 Male, age 18, unknown 16.3
2411 Female, age 72, unknown 15.7
1833 Male, age 53, unknown 14.8
1830 Male, age 51, unknown 14.6
2666 Male, age 74, left hemisphere 13.7
1870 Female, age 42, unknown 12.3
1827 Male, age 72, unknown 11.7
2828 Female, age 72, unknown 11.0
2586 Male, age 75, left hemisphere 9.4
2219 Male, age 76, both hemispheres 8.9
Dorsal raphe nucleus
nTPM: 12.9
2016 Female, age 72, unknown 14.8
2750 Male, age 76, both hemispheres 13.2
2047 Male, age 72, unknown 12.7
1828 Male, age 53, unknown 12.4
2298 Female, age 72, unknown 11.6
Inferior colliculus
nTPM: 12.8
1848 Female, age 42, unknown 13.2
1890 Male, age 53, unknown 13.2
2097 Female, age 72, unknown 12.8
2849 Male, age 72, unknown 12.1
Median raphe nucleus
nTPM: 12.1
2220 Male, age 76, midline 12.1
Pedunculopontine tegmental nucleus
nTPM: 13.9
2338 Male, age 61, both hemispheres 15.1
1921 Female, age 85, both hemispheres 14.4
2334 Male, age 80, both hemispheres 12.2
Periaquaductal grey, anterior
nTPM: 12.9
1947 Male, age 18, unknown 14.3
2502 Female, age 75, unknown 13.0
1795 Male, age 51, unknown 11.3
Periaquaductal grey, dorsal
nTPM: 14.3
1831 Male, age 72, unknown 15.5
2464 Female, age 72, unknown 15.4
2850 Male, age 76, both hemispheres 14.3
1840 Male, age 53, unknown 12.0
Periaquaductal grey, lateral
nTPM: 13.1
2053 Male, age 18, unknown 14.1
2272 Male, age 74, both hemispheres 13.8
2140 Male, age 76, both hemispheres 11.5
Pretectal area
nTPM: 14.7
2007 Male, age 72, unknown 18.2
1817 Female, age 42, unknown 17.4
1815 Male, age 53, unknown 17.3
1944 Female, age 72, unknown 17.2
2273 Male, age 74, both hemispheres 14.9
1816 Male, age 51, unknown 14.6
2407 Male, age 75, both hemispheres 13.7
2667 Female, age 75, unknown 13.6
2224 Female, age 72, unknown 12.6
2316 Male, age 76, right hemisphere 11.4
2825 Male, age 18, unknown 11.4
Red nucleus
nTPM: 15.6
1904 Male, age 53, unknown 17.5
2588 Male, age 74, left hemisphere 17.3
1865 Male, age 51, unknown 16.6
1821 Female, age 72, unknown 16.5
2785 Male, age 18, unknown 16.4
2823 Male, age 76, right hemisphere 16.4
2503 Female, age 72, unknown 15.6
2725 Female, age 75, unknown 15.4
1954 Female, age 42, unknown 14.8
2227 Male, age 72, unknown 14.7
2769 Male, age 72, unknown 13.5
2584 Male, age 75, left hemisphere 12.0
Substantia nigra
nTPM: 13.8
2409 Female, age 72, unknown 18.6
2583 Male, age 75, right hemisphere 16.5
1889 Female, age 72, unknown 16.0
2590 Female, age 75, unknown 15.1
2241 Male, age 72, unknown 12.7
1941 Male, age 53, unknown 12.6
2665 Male, age 74, both hemispheres 12.3
2699 Male, age 18, unknown 12.0
1851 Male, age 51, unknown 11.2
1916 Female, age 42, unknown 10.7
Superior colliculus
nTPM: 13.3
2587 Male, age 74, left hemisphere 15.7
1913 Female, age 42, unknown 15.0
1995 Male, age 72, unknown 14.5
1839 Male, age 51, unknown 14.2
2087 Female, age 72, unknown 14.1
1895 Male, age 76, right hemisphere 13.7
2668 Female, age 75, unknown 12.7
1796 Male, age 53, unknown 11.9
2261 Male, age 18, unknown 11.6
2664 Male, age 75, both hemispheres 9.8
Ventral tegmental area
nTPM: 13.2
2410 Female, age 72, unknown 16.0
2223 Female, age 72, unknown 13.9
1942 Male, age 51, unknown 13.5
2218 Male, age 76, both hemispheres 12.3
2021 Male, age 53, unknown 11.9
1915 Female, age 42, unknown 11.6

MIDBRAIN - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 15.2
Samples: 139

Max nTPM: 29.4
Min nTPM: 7.3
Std nTPM: 3.8
Median nTPM: 15.0
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 29.4
GTEX-139TS-0011-R2b-SM-5J1MX 60-69 years, male 28.3
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 26.6
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 26.6
GTEX-YJ89-0011-R2b-SM-4RGLT 60-69 years, male 23.3
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 23.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 23.0
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 22.0
GTEX-11ZTS-0011-R2b-SM-5BC75 60-69 years, female 21.7
GTEX-1HSMO-0011-R2a-SM-CL553 60-69 years, male 21.7
GTEX-R55E-0011-R2A-SM-EYYV9 20-29 years, male 20.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 53.5
FF:10158-103A5 76 years, female 53.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 35.6
Pig sample Sample description nTPM
Midbrain
nTPM: 35.6
Samples: 4

Max nTPM: 83.5
Min nTPM: 14.4
Sample A Female 83.5
Sample B Female 26.0
Sample C Male 18.4
Sample D Male 14.4
Periaqueductal gray
nTPM: 23.0
Samples: 3

Max nTPM: 24.6
Min nTPM: 20.9
Sample B Female 24.6
Sample C Male 20.9
Sample D Male 23.5
Substantia nigra
nTPM: 29.2
Samples: 4

Max nTPM: 38.3
Min nTPM: 23.0
Sample A Female 31.7
Sample B Female 23.0
Sample C Male 23.9
Sample D Male 38.3
Superior colliculi
nTPM: 25.0
Samples: 4

Max nTPM: 28.8
Min nTPM: 18.1
Sample A Female 28.8
Sample B Female 18.1
Sample C Male 26.3
Sample D Male 26.7

MIDBRAIN - Mouse RNA-seqi
Average nTPM 2.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 2.7
Samples: 4

Max nTPM: 2.8
Min nTPM: 2.5
Sample A Male 2.5
Sample B Male 2.6
Sample C Female 2.7
Sample D Female 2.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.6
74990493 Antisense, RP_060410_01_B03, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.