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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:28.6 nTPM
HPA:28.6 nTPM
GTEx:32.6 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:6.1 nTPM
Mouse:9.3 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031361Antibody HPA031363
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.6
Sample id Sample description nTPM
Hippocampus
nTPM: 27.3
1898 Male, age 80, left hemisphere 31.2
1855 Male, age 76, left hemisphere 28.0
2529 Female, age 94, left hemisphere 26.8
2148 Female, age 91, left hemisphere 26.6
1911 Female, age 85, right hemisphere 26.4
2621 Female, age 67, right hemisphere 25.0
Dentate gyrus
nTPM: 26.6
2010 Male, age 76, both hemispheres 29.6
1927 Female, age 91, both hemispheres 27.0
2528 Male, age 74, both hemispheres 26.6
2530 Female, age 94, left hemisphere 26.5
2246 Female, age 85, both hemispheres 25.8
2531 Female, age 67, both hemispheres 24.0
Entorhinal gyrus
nTPM: 27.8
2764 Male, age 80, right hemisphere 29.5
1787 Male, age 76, left hemisphere 28.6
1938 Female, age 85, left hemisphere 28.2
2117 Female, age 91, right hemisphere 28.0
2613 Female, age 94, left hemisphere 26.4
2686 Male, age 75, right hemisphere 26.1
Hippocampus, CA1
nTPM: 28.1
2749 Male, age 80, left hemisphere 33.4
2045 Male, age 76, both hemispheres 27.8
1873 Female, age 85, both hemispheres 27.1
2082 Female, age 91, right hemisphere 26.2
2527 Male, age 74, both hemispheres 26.0
Hippocampus, CA2
nTPM: 28.6
1963 Male, age 80, left hemisphere 31.1
1892 Male, age 76, both hemispheres 30.9
2249 Male, age 74, both hemispheres 28.1
1940 Female, age 85, left hemisphere 27.5
2113 Female, age 91, right hemisphere 27.2
2437 Female, age 94, left hemisphere 26.8
Hippocampus, CA3
nTPM: 27.3
1867 Male, age 76, both hemispheres 28.9
2137 Male, age 80, left hemisphere 28.1
2436 Male, age 74, both hemispheres 28.0
1891 Female, age 85, both hemispheres 27.3
2620 Female, age 94, left hemisphere 26.2
2861 Female, age 67, both hemispheres 25.4
Parahippocampal cortex
nTPM: 26.8
1850 Male, age 80, both hemispheres 28.7
1990 Female, age 91, right hemisphere 28.7
2018 Male, age 76, both hemispheres 28.4
1933 Female, age 85, both hemispheres 27.7
2250 Female, age 67, right hemisphere 27.2
2245 Female, age 91, both hemispheres 26.6
2692 Male, age 74, both hemispheres 26.0
2693 Female, age 94, both hemispheres 25.2
2532 Female, age 72, left hemisphere 25.0
2622 Female, age 67, right hemisphere 24.8
Perirhinal gyrus
nTPM: 28.3
1847 Female, age 91, left hemisphere 29.8
1794 Male, age 80, right hemisphere 29.5
2848 Male, age 76, right hemisphere 27.7
2521 Female, age 94, right hemisphere 27.4
1841 Female, age 85, right hemisphere 26.9
Subiculum
nTPM: 27.2
1977 Female, age 85, both hemispheres 28.7
1901 Male, age 80, both hemispheres 28.2
2729 Female, age 91, right hemisphere 27.5
2619 Male, age 74, both hemispheres 27.4
2042 Male, age 76, both hemispheres 26.4
2438 Female, age 94, left hemisphere 25.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.6
Samples: 197

Max nTPM: 90.4
Min nTPM: 14.4
Std nTPM: 8.3
Median nTPM: 32.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 90.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 59.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 56.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 55.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 47.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 47.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 45.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 45.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 45.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 45.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.8
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 30.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.3
Sample A Female 6.9
Sample B Female 6.7
Sample C Male 5.4
Sample D Male 5.3
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.3
Sample A Female 6.5
Sample B Female 6.5
Sample C Male 6.2
Sample D Male 5.3
Subiculum
nTPM: 5.9
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.3
Sample A Female 6.8
Sample B Female 5.3
Sample C Male 6.0
Sample D Male 5.4
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.7
Sample A Female 6.4
Sample B Female 5.8
Sample C Male 6.4
Sample D Male 5.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.2
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.4
Sample A Male 7.5
Sample B Male 5.4
Sample C Female 8.7
Sample D Female 7.3
Hippocampal formation
nTPM: 9.3
Samples: 4

Max nTPM: 11.5
Min nTPM: 7.4
Sample A Male 11.5
Sample B Male 7.4
Sample C Female 8.0
Sample D Female 10.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68341621 Antisense, RP_041207_01_H04, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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