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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:19.0 nTPM
HPA:19.0 nTPM
GTEx:16.8 nTPM
FANTOM5:11.3 Scaled Tags Per Million
Pig:8.2 nTPM
Mouse:16.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041227
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.0
Sample id Sample description nTPM
Hippocampus
nTPM: 18.6
2529 Female, age 94, left hemisphere 21.0
1898 Male, age 80, left hemisphere 19.0
2621 Female, age 67, right hemisphere 18.9
2148 Female, age 91, left hemisphere 18.6
1855 Male, age 76, left hemisphere 17.0
1911 Female, age 85, right hemisphere 17.0
Dentate gyrus
nTPM: 18.0
2530 Female, age 94, left hemisphere 21.2
2010 Male, age 76, both hemispheres 18.2
2528 Male, age 74, both hemispheres 17.9
2531 Female, age 67, both hemispheres 17.2
1927 Female, age 91, both hemispheres 17.0
2246 Female, age 85, both hemispheres 16.6
Entorhinal gyrus
nTPM: 19.0
2764 Male, age 80, right hemisphere 20.5
1787 Male, age 76, left hemisphere 19.9
2117 Female, age 91, right hemisphere 19.6
2686 Male, age 75, right hemisphere 18.3
2613 Female, age 94, left hemisphere 17.9
1938 Female, age 85, left hemisphere 17.8
Hippocampus, CA1
nTPM: 17.3
2749 Male, age 80, left hemisphere 18.0
1873 Female, age 85, both hemispheres 17.6
2527 Male, age 74, both hemispheres 17.5
2045 Male, age 76, both hemispheres 17.0
2082 Female, age 91, right hemisphere 16.5
Hippocampus, CA2
nTPM: 18.3
2437 Female, age 94, left hemisphere 20.6
1892 Male, age 76, both hemispheres 18.2
1963 Male, age 80, left hemisphere 18.1
1940 Female, age 85, left hemisphere 18.0
2249 Male, age 74, both hemispheres 17.5
2113 Female, age 91, right hemisphere 17.4
Hippocampus, CA3
nTPM: 17.9
2861 Female, age 67, both hemispheres 18.8
2436 Male, age 74, both hemispheres 18.4
1867 Male, age 76, both hemispheres 18.1
2620 Female, age 94, left hemisphere 17.8
1891 Female, age 85, both hemispheres 17.7
2137 Male, age 80, left hemisphere 16.8
Parahippocampal cortex
nTPM: 18.0
2532 Female, age 72, left hemisphere 20.1
2622 Female, age 67, right hemisphere 20.0
2245 Female, age 91, both hemispheres 19.3
2250 Female, age 67, right hemisphere 18.2
1990 Female, age 91, right hemisphere 17.8
2692 Male, age 74, both hemispheres 17.8
1933 Female, age 85, both hemispheres 17.5
2018 Male, age 76, both hemispheres 17.3
1850 Male, age 80, both hemispheres 16.3
2693 Female, age 94, both hemispheres 15.7
Perirhinal gyrus
nTPM: 18.2
2521 Female, age 94, right hemisphere 19.0
1841 Female, age 85, right hemisphere 18.8
1794 Male, age 80, right hemisphere 18.4
1847 Female, age 91, left hemisphere 17.9
2848 Male, age 76, right hemisphere 16.7
Subiculum
nTPM: 18.8
2438 Female, age 94, left hemisphere 22.0
2042 Male, age 76, both hemispheres 18.5
2729 Female, age 91, right hemisphere 18.3
1901 Male, age 80, both hemispheres 18.0
1977 Female, age 85, both hemispheres 18.0
2619 Male, age 74, both hemispheres 18.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 29.9
Min nTPM: 9.1
Std nTPM: 3.4
Median nTPM: 16.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 29.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 26.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 26.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 25.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 25.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 24.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 23.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 23.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 23.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 23.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 23.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.3
FF:10153-102I9 76 years, female 12.3
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 10.1
Min nTPM: 6.4
Sample A Female 10.1
Sample B Female 7.9
Sample C Male 7.4
Sample D Male 6.4
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.2
Sample A Female 7.7
Sample B Female 9.3
Sample C Male 9.6
Sample D Male 6.2
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.4
Sample A Female 10.6
Sample B Female 6.9
Sample C Male 6.5
Sample D Male 6.4
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 8.9
Min nTPM: 5.4
Sample A Female 7.6
Sample B Female 5.4
Sample C Male 8.9
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 16.7
Min nTPM: 13.2
Sample A Male 13.2
Sample B Male 14.7
Sample C Female 14.4
Sample D Female 16.7
Hippocampal formation
nTPM: 16.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.8
Sample A Male 20.0
Sample B Male 16.6
Sample C Female 14.8
Sample D Female 15.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
77800907 Antisense, RP_070212_03_H11, Mouse strain C57BL/6J (56 days, male) 0.1
71587721 Antisense, RP_050915_04_G10, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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