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HIP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:22.4 nTPM
HPA:22.4 nTPM
GTEx:18.0 nTPM
FANTOM5:31.8 Scaled Tags Per Million
Pig:17.8 nTPM
Mouse:15.5 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013606Antibody HPA017964Antibody CAB015334Antibody CAB016402
Glial cells LowHighLowMedium
Neuronal cells LowNot detectedLowLow









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
2529 Female, age 94, left hemisphere 21.4
1911 Female, age 85, right hemisphere 19.6
2621 Female, age 67, right hemisphere 16.9
1855 Male, age 76, left hemisphere 15.4
1898 Male, age 80, left hemisphere 15.3
2148 Female, age 91, left hemisphere 15.0
Dentate gyrus
nTPM: 17.2
2530 Female, age 94, left hemisphere 23.8
2010 Male, age 76, both hemispheres 18.5
2528 Male, age 74, both hemispheres 17.0
2246 Female, age 85, both hemispheres 16.0
2531 Female, age 67, both hemispheres 15.2
1927 Female, age 91, both hemispheres 12.7
Entorhinal gyrus
nTPM: 19.3
2117 Female, age 91, right hemisphere 25.8
2686 Male, age 75, right hemisphere 22.1
2764 Male, age 80, right hemisphere 20.3
2613 Female, age 94, left hemisphere 18.1
1938 Female, age 85, left hemisphere 15.3
1787 Male, age 76, left hemisphere 14.0
Hippocampus, CA1
nTPM: 15.3
2082 Female, age 91, right hemisphere 17.5
2527 Male, age 74, both hemispheres 16.6
1873 Female, age 85, both hemispheres 16.4
2749 Male, age 80, left hemisphere 13.5
2045 Male, age 76, both hemispheres 12.6
Hippocampus, CA2
nTPM: 17.8
1963 Male, age 80, left hemisphere 22.0
2437 Female, age 94, left hemisphere 21.5
2113 Female, age 91, right hemisphere 18.6
2249 Male, age 74, both hemispheres 16.7
1940 Female, age 85, left hemisphere 15.6
1892 Male, age 76, both hemispheres 12.6
Hippocampus, CA3
nTPM: 14.6
1891 Female, age 85, both hemispheres 22.1
1867 Male, age 76, both hemispheres 17.8
2436 Male, age 74, both hemispheres 13.7
2861 Female, age 67, both hemispheres 12.4
2137 Male, age 80, left hemisphere 11.3
2620 Female, age 94, left hemisphere 10.5
Parahippocampal cortex
nTPM: 16.1
2692 Male, age 74, both hemispheres 21.9
2532 Female, age 72, left hemisphere 19.3
2018 Male, age 76, both hemispheres 18.3
1990 Female, age 91, right hemisphere 17.7
1933 Female, age 85, both hemispheres 15.2
2245 Female, age 91, both hemispheres 15.1
1850 Male, age 80, both hemispheres 14.7
2693 Female, age 94, both hemispheres 14.2
2622 Female, age 67, right hemisphere 13.2
2250 Female, age 67, right hemisphere 11.8
Perirhinal gyrus
nTPM: 12.0
2521 Female, age 94, right hemisphere 13.3
2848 Male, age 76, right hemisphere 12.7
1794 Male, age 80, right hemisphere 12.0
1847 Female, age 91, left hemisphere 11.7
1841 Female, age 85, right hemisphere 10.2
Subiculum
nTPM: 22.4
2042 Male, age 76, both hemispheres 28.1
1901 Male, age 80, both hemispheres 24.5
2438 Female, age 94, left hemisphere 24.4
2619 Male, age 74, both hemispheres 21.0
1977 Female, age 85, both hemispheres 19.1
2729 Female, age 91, right hemisphere 17.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.0
Samples: 197

Max nTPM: 47.8
Min nTPM: 3.2
Std nTPM: 8.7
Median nTPM: 15.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 47.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 47.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 46.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 46.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 40.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 39.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 37.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 37.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 36.5
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 36.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 35.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.8
FF:10153-102I9 76 years, female 43.7
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 20.2
Min nTPM: 11.1
Sample A Female 20.2
Sample B Female 14.7
Sample C Male 18.3
Sample D Male 11.1
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 21.2
Min nTPM: 15.5
Sample A Female 16.8
Sample B Female 21.2
Sample C Male 15.5
Sample D Male 17.6
Subiculum
nTPM: 14.7
Samples: 4

Max nTPM: 17.8
Min nTPM: 12.6
Sample A Female 17.8
Sample B Female 14.7
Sample C Male 12.6
Sample D Male 13.5
Ventral hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 18.1
Min nTPM: 11.8
Sample A Female 15.6
Sample B Female 11.8
Sample C Male 18.1
Sample D Male 18.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 17.3
Min nTPM: 13.2
Sample A Male 14.3
Sample B Male 13.2
Sample C Female 17.3
Sample D Female 17.0
Hippocampal formation
nTPM: 13.4
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.8
Sample A Male 12.9
Sample B Male 11.8
Sample C Female 15.3
Sample D Female 13.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
68342300 Antisense, RP_041214_01_B03, Mouse strain C57BL/6J (56 days, male) 7.3
2293 Antisense, RP_Baylor_103359, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.