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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:100.5 nTPM
HPA:100.5 nTPM
GTEx:123.9 nTPM
FANTOM5:256.8 Scaled Tags Per Million
Pig:123.6 nTPM
Mouse:109.0 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043175
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 100.5
Sample id Sample description nTPM
Hippocampus
nTPM: 91.1
1898 Male, age 80, left hemisphere 107.5
1855 Male, age 76, left hemisphere 91.2
2529 Female, age 94, left hemisphere 89.9
2621 Female, age 67, right hemisphere 88.7
1911 Female, age 85, right hemisphere 86.5
2148 Female, age 91, left hemisphere 83.1
Dentate gyrus
nTPM: 89.4
1927 Female, age 91, both hemispheres 102.3
2010 Male, age 76, both hemispheres 92.8
2246 Female, age 85, both hemispheres 89.9
2530 Female, age 94, left hemisphere 87.7
2528 Male, age 74, both hemispheres 84.7
2531 Female, age 67, both hemispheres 79.1
Entorhinal gyrus
nTPM: 86.6
1938 Female, age 85, left hemisphere 97.4
2764 Male, age 80, right hemisphere 90.9
1787 Male, age 76, left hemisphere 87.4
2613 Female, age 94, left hemisphere 83.0
2686 Male, age 75, right hemisphere 81.1
2117 Female, age 91, right hemisphere 79.9
Hippocampus, CA1
nTPM: 98.7
2749 Male, age 80, left hemisphere 129.6
1873 Female, age 85, both hemispheres 100.2
2527 Male, age 74, both hemispheres 98.1
2045 Male, age 76, both hemispheres 86.0
2082 Female, age 91, right hemisphere 79.8
Hippocampus, CA2
nTPM: 93.5
1892 Male, age 76, both hemispheres 106.3
1963 Male, age 80, left hemisphere 106.3
2249 Male, age 74, both hemispheres 93.0
1940 Female, age 85, left hemisphere 86.9
2437 Female, age 94, left hemisphere 85.6
2113 Female, age 91, right hemisphere 83.2
Hippocampus, CA3
nTPM: 94.9
2137 Male, age 80, left hemisphere 118.1
2436 Male, age 74, both hemispheres 108.1
1867 Male, age 76, both hemispheres 98.4
1891 Female, age 85, both hemispheres 89.2
2861 Female, age 67, both hemispheres 80.2
2620 Female, age 94, left hemisphere 75.5
Parahippocampal cortex
nTPM: 92.2
1850 Male, age 80, both hemispheres 108.5
2250 Female, age 67, right hemisphere 96.8
1933 Female, age 85, both hemispheres 96.5
1990 Female, age 91, right hemisphere 95.5
2245 Female, age 91, both hemispheres 94.8
2693 Female, age 94, both hemispheres 89.8
2018 Male, age 76, both hemispheres 89.4
2532 Female, age 72, left hemisphere 87.5
2692 Male, age 74, both hemispheres 82.9
2622 Female, age 67, right hemisphere 80.0
Perirhinal gyrus
nTPM: 100.5
1847 Female, age 91, left hemisphere 114.4
1841 Female, age 85, right hemisphere 104.8
1794 Male, age 80, right hemisphere 100.4
2521 Female, age 94, right hemisphere 92.6
2848 Male, age 76, right hemisphere 90.1
Subiculum
nTPM: 87.9
1901 Male, age 80, both hemispheres 99.6
1977 Female, age 85, both hemispheres 93.3
2438 Female, age 94, left hemisphere 89.8
2619 Male, age 74, both hemispheres 84.1
2042 Male, age 76, both hemispheres 82.8
2729 Female, age 91, right hemisphere 78.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 123.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 123.9
Samples: 197

Max nTPM: 436.9
Min nTPM: 45.9
Std nTPM: 52.0
Median nTPM: 116.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 436.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 295.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 253.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 252.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 229.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 227.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 224.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 224.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 219.7
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 218.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 215.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 256.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 256.8
FF:10169-103B7 60 years, female 385.0
FF:10153-102I9 76 years, female 128.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 123.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 117.5
Samples: 4

Max nTPM: 137.3
Min nTPM: 92.7
Sample A Female 137.3
Sample B Female 114.0
Sample C Male 125.9
Sample D Male 92.7
Entorhinal cortex
nTPM: 123.6
Samples: 4

Max nTPM: 147.5
Min nTPM: 109.0
Sample A Female 116.9
Sample B Female 147.5
Sample C Male 121.0
Sample D Male 109.0
Subiculum
nTPM: 107.7
Samples: 4

Max nTPM: 119.1
Min nTPM: 97.0
Sample A Female 116.5
Sample B Female 98.2
Sample C Male 97.0
Sample D Male 119.1
Ventral hippocampus
nTPM: 99.1
Samples: 4

Max nTPM: 119.1
Min nTPM: 80.1
Sample A Female 119.1
Sample B Female 80.1
Sample C Male 90.5
Sample D Male 106.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.7
Samples: 4

Max nTPM: 111.0
Min nTPM: 83.6
Sample A Male 111.0
Sample B Male 83.6
Sample C Female 89.2
Sample D Female 90.9
Hippocampal formation
nTPM: 109.0
Samples: 4

Max nTPM: 123.0
Min nTPM: 97.7
Sample A Male 123.0
Sample B Male 103.6
Sample C Female 111.8
Sample D Female 97.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
68522460 Antisense, RP_050118_02_A12, Mouse strain C57BL/6J (56 days, male) 13.2

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The Human Protein Atlas

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