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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:492.6 nTPM
HPA:492.6 nTPM
GTEx:469.6 nTPM
FANTOM5:521.9 Scaled Tags Per Million
Pig:712.4 nTPM
Mouse:520.3 nTPM
Allen mouse:23.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 492.6
Sample id Sample description nTPM
Hippocampus
nTPM: 338.2
1898 Male, age 80, left hemisphere 429.4
2621 Female, age 67, right hemisphere 365.9
1911 Female, age 85, right hemisphere 338.6
1855 Male, age 76, left hemisphere 337.5
2148 Female, age 91, left hemisphere 302.0
2529 Female, age 94, left hemisphere 255.7
Dentate gyrus
nTPM: 341.5
1927 Female, age 91, both hemispheres 482.5
2010 Male, age 76, both hemispheres 351.6
2246 Female, age 85, both hemispheres 347.7
2530 Female, age 94, left hemisphere 311.2
2531 Female, age 67, both hemispheres 281.9
2528 Male, age 74, both hemispheres 274.2
Entorhinal gyrus
nTPM: 352.6
2613 Female, age 94, left hemisphere 413.2
1938 Female, age 85, left hemisphere 412.3
2764 Male, age 80, right hemisphere 397.2
1787 Male, age 76, left hemisphere 347.2
2686 Male, age 75, right hemisphere 295.4
2117 Female, age 91, right hemisphere 250.3
Hippocampus, CA1
nTPM: 408.4
2749 Male, age 80, left hemisphere 690.1
1873 Female, age 85, both hemispheres 407.3
2527 Male, age 74, both hemispheres 330.4
2082 Female, age 91, right hemisphere 310.7
2045 Male, age 76, both hemispheres 303.3
Hippocampus, CA2
nTPM: 361.0
1892 Male, age 76, both hemispheres 458.6
1963 Male, age 80, left hemisphere 447.1
1940 Female, age 85, left hemisphere 351.9
2113 Female, age 91, right hemisphere 314.8
2249 Male, age 74, both hemispheres 303.5
2437 Female, age 94, left hemisphere 290.3
Hippocampus, CA3
nTPM: 373.0
2137 Male, age 80, left hemisphere 618.2
1867 Male, age 76, both hemispheres 364.9
2620 Female, age 94, left hemisphere 326.5
1891 Female, age 85, both hemispheres 321.0
2436 Male, age 74, both hemispheres 318.5
2861 Female, age 67, both hemispheres 288.8
Parahippocampal cortex
nTPM: 388.5
1850 Male, age 80, both hemispheres 518.5
2693 Female, age 94, both hemispheres 422.0
1990 Female, age 91, right hemisphere 419.4
1933 Female, age 85, both hemispheres 416.2
2245 Female, age 91, both hemispheres 414.8
2532 Female, age 72, left hemisphere 370.1
2622 Female, age 67, right hemisphere 351.6
2250 Female, age 67, right hemisphere 350.9
2018 Male, age 76, both hemispheres 322.0
2692 Male, age 74, both hemispheres 299.1
Perirhinal gyrus
nTPM: 492.6
1847 Female, age 91, left hemisphere 593.0
1841 Female, age 85, right hemisphere 532.6
1794 Male, age 80, right hemisphere 487.7
2521 Female, age 94, right hemisphere 462.6
2848 Male, age 76, right hemisphere 387.3
Subiculum
nTPM: 314.9
1901 Male, age 80, both hemispheres 417.2
1977 Female, age 85, both hemispheres 348.9
2042 Male, age 76, both hemispheres 303.2
2619 Male, age 74, both hemispheres 284.5
2438 Female, age 94, left hemisphere 272.8
2729 Female, age 91, right hemisphere 262.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 469.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 469.6
Samples: 197

Max nTPM: 1316.2
Min nTPM: 34.0
Std nTPM: 293.0
Median nTPM: 428.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1316.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1311.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1237.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1098.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1069.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 1064.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1026.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 1009.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 1003.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 999.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 972.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 521.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 521.9
FF:10169-103B7 60 years, female 765.9
FF:10153-102I9 76 years, female 278.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 712.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 596.6
Samples: 4

Max nTPM: 709.1
Min nTPM: 464.5
Sample A Female 709.1
Sample B Female 624.7
Sample C Male 588.2
Sample D Male 464.5
Entorhinal cortex
nTPM: 712.4
Samples: 4

Max nTPM: 868.3
Min nTPM: 598.1
Sample A Female 751.9
Sample B Female 868.3
Sample C Male 631.4
Sample D Male 598.1
Subiculum
nTPM: 466.5
Samples: 4

Max nTPM: 610.9
Min nTPM: 389.4
Sample A Female 610.9
Sample B Female 420.5
Sample C Male 389.4
Sample D Male 445.3
Ventral hippocampus
nTPM: 432.7
Samples: 4

Max nTPM: 662.9
Min nTPM: 320.6
Sample A Female 406.3
Sample B Female 341.1
Sample C Male 320.6
Sample D Male 662.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 520.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 386.7
Samples: 4

Max nTPM: 425.5
Min nTPM: 361.0
Sample A Male 375.4
Sample B Male 425.5
Sample C Female 384.8
Sample D Female 361.0
Hippocampal formation
nTPM: 520.3
Samples: 4

Max nTPM: 548.5
Min nTPM: 453.3
Sample A Male 543.0
Sample B Male 536.4
Sample C Female 548.5
Sample D Female 453.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.8
69838711 Antisense, RP_050317_04_F05, Mouse strain C57BL/6J (56 days, male) 25.3
73718053 Antisense, RP_051121_04_C07, Mouse strain C57BL/6J (56 days, male) 22.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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