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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:48.3 nTPM
HPA:48.3 nTPM
GTEx:35.7 nTPM
FANTOM5:201.4 Scaled Tags Per Million
Pig:150.7 nTPM
Mouse:118.9 nTPM
Allen mouse:19.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041365
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.3
Sample id Sample description nTPM
Hippocampus
nTPM: 23.3
1898 Male, age 80, left hemisphere 37.3
2529 Female, age 94, left hemisphere 25.1
2621 Female, age 67, right hemisphere 22.9
2148 Female, age 91, left hemisphere 22.2
1855 Male, age 76, left hemisphere 19.6
1911 Female, age 85, right hemisphere 12.8
Dentate gyrus
nTPM: 19.7
1927 Female, age 91, both hemispheres 33.5
2246 Female, age 85, both hemispheres 21.9
2010 Male, age 76, both hemispheres 18.4
2528 Male, age 74, both hemispheres 15.4
2530 Female, age 94, left hemisphere 15.1
2531 Female, age 67, both hemispheres 14.1
Entorhinal gyrus
nTPM: 29.7
1938 Female, age 85, left hemisphere 43.6
1787 Male, age 76, left hemisphere 32.5
2764 Male, age 80, right hemisphere 31.9
2686 Male, age 75, right hemisphere 26.8
2613 Female, age 94, left hemisphere 23.3
2117 Female, age 91, right hemisphere 20.2
Hippocampus, CA1
nTPM: 28.5
2749 Male, age 80, left hemisphere 58.5
1873 Female, age 85, both hemispheres 32.3
2527 Male, age 74, both hemispheres 26.4
2082 Female, age 91, right hemisphere 13.6
2045 Male, age 76, both hemispheres 11.5
Hippocampus, CA2
nTPM: 26.1
1892 Male, age 76, both hemispheres 41.5
1963 Male, age 80, left hemisphere 35.5
2437 Female, age 94, left hemisphere 25.5
1940 Female, age 85, left hemisphere 20.0
2113 Female, age 91, right hemisphere 19.1
2249 Male, age 74, both hemispheres 14.8
Hippocampus, CA3
nTPM: 24.1
2137 Male, age 80, left hemisphere 50.4
1867 Male, age 76, both hemispheres 28.0
1891 Female, age 85, both hemispheres 20.0
2620 Female, age 94, left hemisphere 17.7
2861 Female, age 67, both hemispheres 17.0
2436 Male, age 74, both hemispheres 11.8
Parahippocampal cortex
nTPM: 35.0
1850 Male, age 80, both hemispheres 49.5
1933 Female, age 85, both hemispheres 43.1
2250 Female, age 67, right hemisphere 41.3
2245 Female, age 91, both hemispheres 39.0
2693 Female, age 94, both hemispheres 37.5
1990 Female, age 91, right hemisphere 37.4
2532 Female, age 72, left hemisphere 30.0
2692 Male, age 74, both hemispheres 29.1
2622 Female, age 67, right hemisphere 26.5
2018 Male, age 76, both hemispheres 16.8
Perirhinal gyrus
nTPM: 48.3
1841 Female, age 85, right hemisphere 57.9
1847 Female, age 91, left hemisphere 57.7
1794 Male, age 80, right hemisphere 49.4
2521 Female, age 94, right hemisphere 38.9
2848 Male, age 76, right hemisphere 37.3
Subiculum
nTPM: 21.9
1977 Female, age 85, both hemispheres 32.1
2438 Female, age 94, left hemisphere 32.1
1901 Male, age 80, both hemispheres 26.1
2619 Male, age 74, both hemispheres 20.5
2729 Female, age 91, right hemisphere 17.0
2042 Male, age 76, both hemispheres 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.7
Samples: 197

Max nTPM: 83.0
Min nTPM: 6.9
Std nTPM: 12.5
Median nTPM: 33.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 83.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 78.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 76.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 74.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 72.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 68.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 65.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 65.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 60.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 57.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 201.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 201.4
FF:10169-103B7 60 years, female 221.8
FF:10153-102I9 76 years, female 181.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 150.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 105.3
Samples: 4

Max nTPM: 126.0
Min nTPM: 91.9
Sample A Female 107.1
Sample B Female 96.0
Sample C Male 126.0
Sample D Male 91.9
Entorhinal cortex
nTPM: 150.7
Samples: 4

Max nTPM: 161.0
Min nTPM: 141.2
Sample A Female 141.2
Sample B Female 161.0
Sample C Male 147.5
Sample D Male 153.0
Subiculum
nTPM: 115.2
Samples: 4

Max nTPM: 137.4
Min nTPM: 99.7
Sample A Female 137.4
Sample B Female 99.7
Sample C Male 111.7
Sample D Male 111.8
Ventral hippocampus
nTPM: 97.5
Samples: 4

Max nTPM: 110.4
Min nTPM: 78.7
Sample A Female 97.5
Sample B Female 78.7
Sample C Male 110.4
Sample D Male 103.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 118.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 118.9
Samples: 4

Max nTPM: 141.6
Min nTPM: 105.9
Sample A Male 114.6
Sample B Male 105.9
Sample C Female 113.3
Sample D Female 141.6
Hippocampal formation
nTPM: 109.3
Samples: 4

Max nTPM: 122.4
Min nTPM: 96.3
Sample A Male 101.4
Sample B Male 116.9
Sample C Female 122.4
Sample D Female 96.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.5
69116685 Antisense, RP_050317_02_H11, Mouse strain C57BL/6J (56 days, male) 19.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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