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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:67.3 nTPM
HPA:67.3 nTPM
GTEx:72.4 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Pig:13.7 nTPM
Mouse:32.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051806
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.3
Sample id Sample description nTPM
Hippocampus
nTPM: 63.1
2529 Female, age 94, left hemisphere 65.8
1911 Female, age 85, right hemisphere 65.2
1898 Male, age 80, left hemisphere 64.5
2621 Female, age 67, right hemisphere 62.2
2148 Female, age 91, left hemisphere 61.1
1855 Male, age 76, left hemisphere 59.7
Dentate gyrus
nTPM: 63.8
2530 Female, age 94, left hemisphere 71.3
2010 Male, age 76, both hemispheres 65.3
2528 Male, age 74, both hemispheres 64.9
2246 Female, age 85, both hemispheres 61.7
1927 Female, age 91, both hemispheres 60.1
2531 Female, age 67, both hemispheres 59.8
Entorhinal gyrus
nTPM: 67.3
2764 Male, age 80, right hemisphere 73.4
2117 Female, age 91, right hemisphere 69.9
2613 Female, age 94, left hemisphere 69.2
1787 Male, age 76, left hemisphere 64.3
2686 Male, age 75, right hemisphere 63.9
1938 Female, age 85, left hemisphere 63.1
Hippocampus, CA1
nTPM: 62.5
2749 Male, age 80, left hemisphere 65.9
2527 Male, age 74, both hemispheres 64.6
1873 Female, age 85, both hemispheres 62.0
2082 Female, age 91, right hemisphere 61.9
2045 Male, age 76, both hemispheres 58.2
Hippocampus, CA2
nTPM: 64.3
2249 Male, age 74, both hemispheres 66.8
1963 Male, age 80, left hemisphere 65.4
1940 Female, age 85, left hemisphere 65.0
2437 Female, age 94, left hemisphere 64.7
2113 Female, age 91, right hemisphere 63.6
1892 Male, age 76, both hemispheres 60.5
Hippocampus, CA3
nTPM: 60.7
2620 Female, age 94, left hemisphere 65.5
1891 Female, age 85, both hemispheres 63.9
1867 Male, age 76, both hemispheres 59.4
2137 Male, age 80, left hemisphere 59.4
2436 Male, age 74, both hemispheres 58.7
2861 Female, age 67, both hemispheres 57.6
Parahippocampal cortex
nTPM: 63.4
2692 Male, age 74, both hemispheres 67.6
2532 Female, age 72, left hemisphere 67.1
1990 Female, age 91, right hemisphere 65.2
1933 Female, age 85, both hemispheres 65.0
2245 Female, age 91, both hemispheres 63.7
2018 Male, age 76, both hemispheres 63.1
1850 Male, age 80, both hemispheres 62.1
2250 Female, age 67, right hemisphere 61.4
2693 Female, age 94, both hemispheres 60.7
2622 Female, age 67, right hemisphere 58.4
Perirhinal gyrus
nTPM: 63.8
1794 Male, age 80, right hemisphere 66.3
2521 Female, age 94, right hemisphere 63.6
2848 Male, age 76, right hemisphere 63.6
1841 Female, age 85, right hemisphere 63.4
1847 Female, age 91, left hemisphere 61.9
Subiculum
nTPM: 65.5
1977 Female, age 85, both hemispheres 69.3
2619 Male, age 74, both hemispheres 68.7
2042 Male, age 76, both hemispheres 67.7
1901 Male, age 80, both hemispheres 66.4
2729 Female, age 91, right hemisphere 61.8
2438 Female, age 94, left hemisphere 59.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.4
Samples: 197

Max nTPM: 194.0
Min nTPM: 7.6
Std nTPM: 22.8
Median nTPM: 69.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 194.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 170.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 143.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 137.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 133.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 121.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 116.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 109.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 109.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 109.3
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 108.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.8
FF:10153-102I9 76 years, female 23.0
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 21.5
Min nTPM: 8.5
Sample A Female 21.5
Sample B Female 10.5
Sample C Male 14.3
Sample D Male 8.5
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.0
Sample A Female 7.1
Sample B Female 8.4
Sample C Male 8.2
Sample D Male 6.0
Subiculum
nTPM: 7.7
Samples: 4

Max nTPM: 9.9
Min nTPM: 5.6
Sample A Female 9.9
Sample B Female 8.3
Sample C Male 5.6
Sample D Male 7.1
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.7
Sample A Female 11.7
Sample B Female 7.7
Sample C Male 10.8
Sample D Male 11.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 24.2
Min nTPM: 15.8
Sample A Male 18.6
Sample B Male 15.9
Sample C Female 24.2
Sample D Female 15.8
Hippocampal formation
nTPM: 32.8
Samples: 4

Max nTPM: 44.2
Min nTPM: 23.9
Sample A Male 26.8
Sample B Male 23.9
Sample C Female 44.2
Sample D Female 36.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
69262341 Antisense, RP_050303_02_B11, Mouse strain C57BL/6J (56 days, male) 1.7

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