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FAM98C
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.8 nTPM
HPA:13.8 nTPM
GTEx:23.7 nTPM
FANTOM5:12.2 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:13.2 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040930Antibody HPA041730
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.8
Sample id Sample description nTPM
Hippocampus
nTPM: 12.3
2529 Female, age 94, left hemisphere 14.6
1898 Male, age 80, left hemisphere 14.1
2148 Female, age 91, left hemisphere 12.5
2621 Female, age 67, right hemisphere 11.6
1911 Female, age 85, right hemisphere 10.7
1855 Male, age 76, left hemisphere 10.4
Dentate gyrus
nTPM: 12.5
2531 Female, age 67, both hemispheres 15.0
2530 Female, age 94, left hemisphere 14.8
2528 Male, age 74, both hemispheres 12.8
1927 Female, age 91, both hemispheres 11.8
2010 Male, age 76, both hemispheres 10.9
2246 Female, age 85, both hemispheres 9.9
Entorhinal gyrus
nTPM: 13.8
2764 Male, age 80, right hemisphere 16.2
2117 Female, age 91, right hemisphere 14.7
2613 Female, age 94, left hemisphere 14.6
2686 Male, age 75, right hemisphere 13.9
1787 Male, age 76, left hemisphere 12.3
1938 Female, age 85, left hemisphere 11.1
Hippocampus, CA1
nTPM: 11.7
2749 Male, age 80, left hemisphere 13.2
2527 Male, age 74, both hemispheres 12.8
1873 Female, age 85, both hemispheres 11.3
2082 Female, age 91, right hemisphere 10.7
2045 Male, age 76, both hemispheres 10.2
Hippocampus, CA2
nTPM: 12.1
1963 Male, age 80, left hemisphere 17.9
1892 Male, age 76, both hemispheres 12.4
2437 Female, age 94, left hemisphere 12.3
2113 Female, age 91, right hemisphere 10.6
1940 Female, age 85, left hemisphere 9.9
2249 Male, age 74, both hemispheres 9.6
Hippocampus, CA3
nTPM: 11.5
2861 Female, age 67, both hemispheres 14.9
2620 Female, age 94, left hemisphere 12.1
1867 Male, age 76, both hemispheres 11.5
2137 Male, age 80, left hemisphere 11.4
1891 Female, age 85, both hemispheres 10.7
2436 Male, age 74, both hemispheres 8.3
Parahippocampal cortex
nTPM: 11.8
1990 Female, age 91, right hemisphere 13.4
2622 Female, age 67, right hemisphere 12.9
2245 Female, age 91, both hemispheres 12.6
1933 Female, age 85, both hemispheres 12.5
2532 Female, age 72, left hemisphere 12.0
2250 Female, age 67, right hemisphere 11.5
1850 Male, age 80, both hemispheres 11.3
2692 Male, age 74, both hemispheres 10.8
2018 Male, age 76, both hemispheres 10.6
2693 Female, age 94, both hemispheres 10.2
Perirhinal gyrus
nTPM: 11.8
1794 Male, age 80, right hemisphere 13.5
2521 Female, age 94, right hemisphere 12.4
1847 Female, age 91, left hemisphere 11.6
1841 Female, age 85, right hemisphere 11.5
2848 Male, age 76, right hemisphere 10.1
Subiculum
nTPM: 11.6
1977 Female, age 85, both hemispheres 14.9
1901 Male, age 80, both hemispheres 13.8
2619 Male, age 74, both hemispheres 11.5
2729 Female, age 91, right hemisphere 11.4
2042 Male, age 76, both hemispheres 10.3
2438 Female, age 94, left hemisphere 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 51.1
Min nTPM: 7.4
Std nTPM: 6.7
Median nTPM: 22.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 51.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 45.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 44.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 41.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 41.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 39.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 39.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 37.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 35.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.2
FF:10169-103B7 60 years, female 12.5
FF:10153-102I9 76 years, female 11.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 13.4
Min nTPM: 6.5
Sample A Female 13.4
Sample B Female 9.3
Sample C Male 9.9
Sample D Male 6.5
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 12.1
Min nTPM: 8.3
Sample A Female 9.0
Sample B Female 10.6
Sample C Male 12.1
Sample D Male 8.3
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 13.2
Min nTPM: 7.2
Sample A Female 13.2
Sample B Female 7.9
Sample C Male 9.4
Sample D Male 7.2
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 12.3
Min nTPM: 7.1
Sample A Female 9.5
Sample B Female 7.1
Sample C Male 12.3
Sample D Male 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 16.7
Min nTPM: 7.9
Sample A Male 16.7
Sample B Male 12.6
Sample C Female 15.4
Sample D Female 7.9
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.2
Sample A Male 10.9
Sample B Male 12.7
Sample C Female 10.2
Sample D Female 15.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
68410614 Antisense, RP_041214_02_C06, Mouse strain C57BL/6J (56 days, male) 3.1

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